Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.28■■□□□ 1.16
USP46P62068 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP46P62068 AC233723.2-201ENST00000623798 2106 ntBASIC22.28■■□□□ 1.16
USP46P62068 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP46P62068 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP46P62068 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
USP46P62068 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.27■■□□□ 1.16
USP46P62068 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP46P62068 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.27■■□□□ 1.16
USP46P62068 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.27■■□□□ 1.16
USP46P62068 SLC7A5P2-201ENST00000553010 536 ntBASIC22.27■■□□□ 1.16
USP46P62068 DUX4L16-201ENST00000555130 1264 ntBASIC22.27■■□□□ 1.16
USP46P62068 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
USP46P62068 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP46P62068 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
USP46P62068 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
USP46P62068 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.26■■□□□ 1.15
USP46P62068 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.26■■□□□ 1.15
USP46P62068 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
USP46P62068 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
USP46P62068 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
USP46P62068 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
USP46P62068 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
USP46P62068 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.26■■□□□ 1.15
USP46P62068 ID1-201ENST00000376105 1233 ntBASIC22.26■■□□□ 1.15
USP46P62068 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.26■■□□□ 1.15
USP46P62068 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
USP46P62068 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.26■■□□□ 1.15
USP46P62068 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.26■■□□□ 1.15
USP46P62068 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
USP46P62068 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
USP46P62068 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
USP46P62068 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USP46P62068 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
USP46P62068 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 FAM99A-202ENST00000538190 1989 ntBASIC22.25■■□□□ 1.15
USP46P62068 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.25■■□□□ 1.15
USP46P62068 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.25■■□□□ 1.15
USP46P62068 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
USP46P62068 AC010542.4-201ENST00000563151 1910 ntBASIC22.25■■□□□ 1.15
USP46P62068 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 GUSBP5-202ENST00000510805 1989 ntBASIC22.25■■□□□ 1.15
USP46P62068 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP46P62068 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
USP46P62068 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.24■■□□□ 1.15
USP46P62068 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
USP46P62068 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.24■■□□□ 1.15
USP46P62068 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP46P62068 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.24■■□□□ 1.15
USP46P62068 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.24■■□□□ 1.15
USP46P62068 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.24■■□□□ 1.15
USP46P62068 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.24■■□□□ 1.15
USP46P62068 KRT18P20-201ENST00000548986 1279 ntBASIC22.24■■□□□ 1.15
USP46P62068 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.24■■□□□ 1.15
USP46P62068 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.24■■□□□ 1.15
USP46P62068 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.24■■□□□ 1.15
USP46P62068 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP46P62068 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
USP46P62068 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.23■■□□□ 1.15
USP46P62068 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP46P62068 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.23■■□□□ 1.15
USP46P62068 HLA-L-209ENST00000420110 1011 ntBASIC22.23■■□□□ 1.15
USP46P62068 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.23■■□□□ 1.15
USP46P62068 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
USP46P62068 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
USP46P62068 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
USP46P62068 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.23■■□□□ 1.15
USP46P62068 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP46P62068 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.23■■□□□ 1.15
USP46P62068 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.23■■□□□ 1.15
USP46P62068 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
USP46P62068 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
USP46P62068 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USP46P62068 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
USP46P62068 MIR663A-201ENST00000385250 93 ntBASIC22.22■■□□□ 1.15
USP46P62068 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
USP46P62068 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
USP46P62068 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.22■■□□□ 1.15
USP46P62068 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USP46P62068 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.22■■□□□ 1.15
USP46P62068 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
USP46P62068 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.22■■□□□ 1.15
USP46P62068 AC242852.2-201ENST00000615738 1807 ntBASIC22.22■■□□□ 1.15
USP46P62068 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USP46P62068 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP46P62068 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.21■■□□□ 1.15
USP46P62068 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP46P62068 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP46P62068 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.21■■□□□ 1.15
USP46P62068 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
USP46P62068 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms