Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CKS1BP61024 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.69□□□□□ -0.06
CKS1BP61024 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CKS1BP61024 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CKS1BP61024 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CKS1BP61024 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS1BP61024 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.68□□□□□ -0.06
CKS1BP61024 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CKS1BP61024 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS1BP61024 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS1BP61024 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS1BP61024 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS1BP61024 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS1BP61024 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS1BP61024 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CKS1BP61024 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CKS1BP61024 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.68□□□□□ -0.06
CKS1BP61024 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CKS1BP61024 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CKS1BP61024 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CKS1BP61024 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS1BP61024 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.67□□□□□ -0.06
CKS1BP61024 AC080038.3-201ENST00000623346 1952 ntBASIC14.67□□□□□ -0.06
CKS1BP61024 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CKS1BP61024 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 LINC01529-204ENST00000636474 1715 ntBASIC14.67□□□□□ -0.06
CKS1BP61024 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CKS1BP61024 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.67□□□□□ -0.06
CKS1BP61024 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.67□□□□□ -0.06
CKS1BP61024 LTB4R2-202ENST00000528054 3092 ntBASIC14.67□□□□□ -0.06
CKS1BP61024 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.67□□□□□ -0.06
CKS1BP61024 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.67□□□□□ -0.06
CKS1BP61024 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.67□□□□□ -0.06
CKS1BP61024 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.67□□□□□ -0.06
CKS1BP61024 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKS1BP61024 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKS1BP61024 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS1BP61024 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS1BP61024 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS1BP61024 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CKS1BP61024 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS1BP61024 ATP5G2P3-201ENST00000429083 425 ntBASIC14.66□□□□□ -0.06
CKS1BP61024 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.66□□□□□ -0.06
CKS1BP61024 AC010980.1-201ENST00000587192 1142 ntBASIC14.66□□□□□ -0.06
CKS1BP61024 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS1BP61024 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.66□□□□□ -0.06
CKS1BP61024 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKS1BP61024 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CKS1BP61024 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKS1BP61024 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.66□□□□□ -0.06
CKS1BP61024 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CKS1BP61024 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CKS1BP61024 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.65□□□□□ -0.06
CKS1BP61024 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CKS1BP61024 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.65□□□□□ -0.06
CKS1BP61024 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CKS1BP61024 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
CKS1BP61024 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CKS1BP61024 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKS1BP61024 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKS1BP61024 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CKS1BP61024 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms