Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM11AP58511 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.44■□□□□ 0.7
SMIM11AP58511 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM11AP58511 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SMIM11AP58511 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMIM11AP58511 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM11AP58511 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SMIM11AP58511 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM11AP58511 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM11AP58511 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 AC073130.3-201ENST00000624389 2278 ntBASIC19.44■□□□□ 0.7
SMIM11AP58511 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM11AP58511 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.43■□□□□ 0.7
SMIM11AP58511 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.43■□□□□ 0.7
SMIM11AP58511 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.43■□□□□ 0.7
SMIM11AP58511 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.43■□□□□ 0.7
SMIM11AP58511 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.43■□□□□ 0.7
SMIM11AP58511 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
SMIM11AP58511 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.43■□□□□ 0.7
SMIM11AP58511 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SMIM11AP58511 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM11AP58511 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM11AP58511 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SMIM11AP58511 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM11AP58511 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 SYT6-210ENST00000641643 1587 ntBASIC19.42■□□□□ 0.7
SMIM11AP58511 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMIM11AP58511 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMIM11AP58511 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SMIM11AP58511 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SMIM11AP58511 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM11AP58511 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.41■□□□□ 0.7
SMIM11AP58511 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMIM11AP58511 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.41■□□□□ 0.7
SMIM11AP58511 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.41■□□□□ 0.7
SMIM11AP58511 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM11AP58511 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM11AP58511 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SMIM11AP58511 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMIM11AP58511 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM11AP58511 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM11AP58511 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM11AP58511 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM11AP58511 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SMIM11AP58511 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.4■□□□□ 0.7
SMIM11AP58511 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SMIM11AP58511 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM11AP58511 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM11AP58511 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.4■□□□□ 0.7
SMIM11AP58511 AC136469.2-201ENST00000623944 1028 ntBASIC19.4■□□□□ 0.7
SMIM11AP58511 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM11AP58511 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMIM11AP58511 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM11AP58511 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM11AP58511 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMIM11AP58511 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMIM11AP58511 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.39■□□□□ 0.7
SMIM11AP58511 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMIM11AP58511 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMIM11AP58511 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SMIM11AP58511 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM11AP58511 AL157384.1-201ENST00000445995 2473 ntBASIC19.39■□□□□ 0.69
SMIM11AP58511 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SMIM11AP58511 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms