Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN2P57739 AF201337.1-201ENST00000520239 748 ntBASIC20.94■□□□□ 0.94
CLDN2P57739 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN2P57739 AC120498.10-201ENST00000621827 505 ntBASIC20.94■□□□□ 0.94
CLDN2P57739 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN2P57739 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN2P57739 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN2P57739 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN2P57739 AC068338.2-201ENST00000563278 1430 ntBASIC20.94■□□□□ 0.94
CLDN2P57739 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN2P57739 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN2P57739 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN2P57739 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN2P57739 SLC29A4P1-201ENST00000398760 971 ntBASIC20.93■□□□□ 0.94
CLDN2P57739 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLDN2P57739 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN2P57739 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLDN2P57739 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN2P57739 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN2P57739 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN2P57739 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN2P57739 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLDN2P57739 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLDN2P57739 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN2P57739 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN2P57739 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLDN2P57739 AC061975.6-201ENST00000579045 1553 ntBASIC20.93■□□□□ 0.94
CLDN2P57739 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN2P57739 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.93■□□□□ 0.94
CLDN2P57739 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLDN2P57739 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CLDN2P57739 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN2P57739 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLDN2P57739 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN2P57739 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CLDN2P57739 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN2P57739 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN2P57739 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN2P57739 POU5F1P4-201ENST00000413175 1085 ntBASIC20.92■□□□□ 0.94
CLDN2P57739 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN2P57739 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.92■□□□□ 0.94
CLDN2P57739 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN2P57739 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN2P57739 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
CLDN2P57739 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN2P57739 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN2P57739 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CLDN2P57739 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN2P57739 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN2P57739 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN2P57739 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN2P57739 CYP2T1P-201ENST00000432607 1285 ntBASIC20.91■□□□□ 0.94
CLDN2P57739 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN2P57739 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDN2P57739 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.91■□□□□ 0.94
CLDN2P57739 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN2P57739 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.91■□□□□ 0.94
CLDN2P57739 AC133552.2-202ENST00000575694 574 ntBASIC20.91■□□□□ 0.94
CLDN2P57739 AC068473.5-201ENST00000616428 2072 ntBASIC20.91■□□□□ 0.94
CLDN2P57739 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.91■□□□□ 0.94
CLDN2P57739 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLDN2P57739 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN2P57739 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN2P57739 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CLDN2P57739 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CLDN2P57739 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLDN2P57739 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLDN2P57739 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN2P57739 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.9■□□□□ 0.94
CLDN2P57739 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN2P57739 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN2P57739 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN2P57739 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN2P57739 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.89■□□□□ 0.94
CLDN2P57739 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN2P57739 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CLDN2P57739 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.89■□□□□ 0.94
CLDN2P57739 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN2P57739 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLDN2P57739 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN2P57739 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN2P57739 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLDN2P57739 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.89■□□□□ 0.93
CLDN2P57739 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.89■□□□□ 0.93
CLDN2P57739 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN2P57739 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN2P57739 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN2P57739 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN2P57739 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms