Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB38P57729 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 LINC00565-201ENST00000562710 2331 ntBASIC19.93■□□□□ 0.78
RAB38P57729 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB38P57729 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB38P57729 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB38P57729 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 AC244015.2-201ENST00000616358 1861 ntBASIC19.93■□□□□ 0.78
RAB38P57729 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB38P57729 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB38P57729 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
RAB38P57729 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB38P57729 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RAB38P57729 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAB38P57729 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB38P57729 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RAB38P57729 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.92■□□□□ 0.78
RAB38P57729 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 AC010141.2-201ENST00000452426 721 ntBASIC19.92■□□□□ 0.78
RAB38P57729 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
RAB38P57729 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB38P57729 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RAB38P57729 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB38P57729 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB38P57729 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB38P57729 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.91■□□□□ 0.78
RAB38P57729 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.91■□□□□ 0.78
RAB38P57729 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.91■□□□□ 0.78
RAB38P57729 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB38P57729 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB38P57729 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB38P57729 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB38P57729 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RAB38P57729 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB38P57729 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB38P57729 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB38P57729 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB38P57729 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB38P57729 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB38P57729 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB38P57729 AP001160.3-201ENST00000601484 763 ntBASIC19.9■□□□□ 0.78
RAB38P57729 AC008175.2-201ENST00000612840 297 ntBASIC19.9■□□□□ 0.78
RAB38P57729 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB38P57729 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB38P57729 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB38P57729 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB38P57729 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB38P57729 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB38P57729 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB38P57729 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.89■□□□□ 0.77
RAB38P57729 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB38P57729 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB38P57729 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAB38P57729 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB38P57729 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.89■□□□□ 0.77
RAB38P57729 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.89■□□□□ 0.77
RAB38P57729 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB38P57729 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB38P57729 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB38P57729 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RAB38P57729 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB38P57729 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB38P57729 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB38P57729 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB38P57729 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms