Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAV3P56539 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.77■□□□□ 0.6
CAV3P56539 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.77■□□□□ 0.6
CAV3P56539 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAV3P56539 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CAV3P56539 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAV3P56539 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CAV3P56539 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAV3P56539 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.77■□□□□ 0.6
CAV3P56539 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.76■□□□□ 0.59
CAV3P56539 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAV3P56539 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAV3P56539 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CAV3P56539 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CAV3P56539 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAV3P56539 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAV3P56539 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.76■□□□□ 0.59
CAV3P56539 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.76■□□□□ 0.59
CAV3P56539 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAV3P56539 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.76■□□□□ 0.59
CAV3P56539 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAV3P56539 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CAV3P56539 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CAV3P56539 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAV3P56539 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.76■□□□□ 0.59
CAV3P56539 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.75■□□□□ 0.59
CAV3P56539 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.75■□□□□ 0.59
CAV3P56539 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.75■□□□□ 0.59
CAV3P56539 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.75■□□□□ 0.59
CAV3P56539 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.75■□□□□ 0.59
CAV3P56539 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CAV3P56539 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAV3P56539 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
CAV3P56539 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.74■□□□□ 0.59
CAV3P56539 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.74■□□□□ 0.59
CAV3P56539 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.74■□□□□ 0.59
CAV3P56539 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.74■□□□□ 0.59
CAV3P56539 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CAV3P56539 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.74■□□□□ 0.59
CAV3P56539 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.74■□□□□ 0.59
CAV3P56539 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CAV3P56539 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAV3P56539 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAV3P56539 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CAV3P56539 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.73■□□□□ 0.59
CAV3P56539 AFG3L1P-217ENST00000557444 2447 ntBASIC18.73■□□□□ 0.59
CAV3P56539 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CAV3P56539 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CAV3P56539 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CAV3P56539 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CAV3P56539 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CAV3P56539 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAV3P56539 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAV3P56539 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CAV3P56539 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.73■□□□□ 0.59
CAV3P56539 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CAV3P56539 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.73■□□□□ 0.59
CAV3P56539 AC131212.1-201ENST00000613771 668 ntBASIC18.73■□□□□ 0.59
CAV3P56539 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAV3P56539 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
CAV3P56539 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CAV3P56539 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAV3P56539 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.73■□□□□ 0.59
CAV3P56539 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAV3P56539 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAV3P56539 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAV3P56539 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.72■□□□□ 0.59
CAV3P56539 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CAV3P56539 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.72■□□□□ 0.59
CAV3P56539 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAV3P56539 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.72■□□□□ 0.59
CAV3P56539 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms