Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
NR1H2P55055 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.9■□□□□ 0.78
NR1H2P55055 PBX2P1-201ENST00000493219 1291 ntBASIC19.9■□□□□ 0.78
NR1H2P55055 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.9■□□□□ 0.78
NR1H2P55055 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.9■□□□□ 0.78
NR1H2P55055 AC092171.4-201ENST00000609130 632 ntBASIC19.9■□□□□ 0.78
NR1H2P55055 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.9■□□□□ 0.78
NR1H2P55055 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H2P55055 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.9■□□□□ 0.78
NR1H2P55055 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.89■□□□□ 0.78
NR1H2P55055 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
NR1H2P55055 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.89■□□□□ 0.77
NR1H2P55055 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NR1H2P55055 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NR1H2P55055 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.89■□□□□ 0.77
NR1H2P55055 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.89■□□□□ 0.77
NR1H2P55055 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.89■□□□□ 0.77
NR1H2P55055 DUX4L19-201ENST00000557448 1267 ntBASIC19.89■□□□□ 0.77
NR1H2P55055 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.89■□□□□ 0.77
NR1H2P55055 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR1H2P55055 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NR1H2P55055 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NR1H2P55055 AC144652.1-201ENST00000609974 1624 ntBASIC19.88■□□□□ 0.77
NR1H2P55055 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NR1H2P55055 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.88■□□□□ 0.77
NR1H2P55055 UNC93B3-201ENST00000308076 687 ntBASIC19.88■□□□□ 0.77
NR1H2P55055 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.88■□□□□ 0.77
NR1H2P55055 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.88■□□□□ 0.77
NR1H2P55055 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.88■□□□□ 0.77
NR1H2P55055 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NR1H2P55055 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR1H2P55055 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.88■□□□□ 0.77
NR1H2P55055 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
NR1H2P55055 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.87■□□□□ 0.77
NR1H2P55055 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NR1H2P55055 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NR1H2P55055 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.87■□□□□ 0.77
NR1H2P55055 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
NR1H2P55055 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
NR1H2P55055 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR1H2P55055 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
NR1H2P55055 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.86■□□□□ 0.77
NR1H2P55055 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.86■□□□□ 0.77
NR1H2P55055 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 AC135279.3-201ENST00000610945 1311 ntBASIC19.86■□□□□ 0.77
NR1H2P55055 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 AL136162.1-201ENST00000607711 1078 ntBASIC19.86■□□□□ 0.77
NR1H2P55055 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 AC087289.5-201ENST00000586076 3175 ntBASIC19.86■□□□□ 0.77
NR1H2P55055 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 AC131274.2-201ENST00000580697 1507 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms