Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC231657.2-201ENST00000624556 255 ntBASIC21.5■■□□□ 1.03
ATXN3P54252 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN3P54252 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
ATXN3P54252 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN3P54252 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN3P54252 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.5■■□□□ 1.03
ATXN3P54252 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ATXN3P54252 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ATXN3P54252 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.49■■□□□ 1.03
ATXN3P54252 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 SLC29A4P1-201ENST00000398760 971 ntBASIC21.49■■□□□ 1.03
ATXN3P54252 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ATXN3P54252 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ATXN3P54252 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.49■■□□□ 1.03
ATXN3P54252 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.49■■□□□ 1.03
ATXN3P54252 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ATXN3P54252 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ATXN3P54252 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.49■■□□□ 1.03
ATXN3P54252 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATXN3P54252 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.49■■□□□ 1.03
ATXN3P54252 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.49■■□□□ 1.03
ATXN3P54252 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN3P54252 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.48■■□□□ 1.03
ATXN3P54252 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.48■■□□□ 1.03
ATXN3P54252 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ATXN3P54252 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
ATXN3P54252 KRT18P6-201ENST00000555540 1265 ntBASIC21.48■■□□□ 1.03
ATXN3P54252 AC142086.2-201ENST00000569753 217 ntBASIC21.48■■□□□ 1.03
ATXN3P54252 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
ATXN3P54252 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.48■■□□□ 1.03
ATXN3P54252 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN3P54252 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN3P54252 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATXN3P54252 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.47■■□□□ 1.03
ATXN3P54252 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.47■■□□□ 1.03
ATXN3P54252 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ATXN3P54252 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ATXN3P54252 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.47■■□□□ 1.03
ATXN3P54252 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.47■■□□□ 1.03
ATXN3P54252 MFSD11-216ENST00000590393 1141 ntBASIC21.47■■□□□ 1.03
ATXN3P54252 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATXN3P54252 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ATXN3P54252 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.46■■□□□ 1.03
ATXN3P54252 AC007322.1-201ENST00000426983 750 ntBASIC21.46■■□□□ 1.03
ATXN3P54252 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.46■■□□□ 1.03
ATXN3P54252 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.46■■□□□ 1.03
ATXN3P54252 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.46■■□□□ 1.03
ATXN3P54252 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.46■■□□□ 1.03
ATXN3P54252 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATXN3P54252 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ATXN3P54252 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.45■■□□□ 1.03
ATXN3P54252 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.03
ATXN3P54252 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.45■■□□□ 1.02
ATXN3P54252 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.45■■□□□ 1.02
ATXN3P54252 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 TSPY6P-201ENST00000448518 926 ntBASIC21.45■■□□□ 1.02
ATXN3P54252 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 AC005181.1-201ENST00000604782 1256 ntBASIC21.45■■□□□ 1.02
ATXN3P54252 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.45■■□□□ 1.02
ATXN3P54252 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ATXN3P54252 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATXN3P54252 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.44■■□□□ 1.02
ATXN3P54252 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATXN3P54252 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATXN3P54252 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms