Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CLTCL1P53675 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CLTCL1P53675 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC30.58■■■□□ 2.49
CLTCL1P53675 DUSP5P2-201ENST00000426873 1033 ntBASIC30.58■■■□□ 2.49
CLTCL1P53675 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CLTCL1P53675 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC30.58■■■□□ 2.49
CLTCL1P53675 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
CLTCL1P53675 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
CLTCL1P53675 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC30.57■■■□□ 2.48
CLTCL1P53675 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CLTCL1P53675 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC30.57■■■□□ 2.48
CLTCL1P53675 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CLTCL1P53675 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CLTCL1P53675 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CLTCL1P53675 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.57■■■□□ 2.48
CLTCL1P53675 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.57■■■□□ 2.48
CLTCL1P53675 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
CLTCL1P53675 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
CLTCL1P53675 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC30.56■■■□□ 2.48
CLTCL1P53675 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC30.56■■■□□ 2.48
CLTCL1P53675 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC30.56■■■□□ 2.48
CLTCL1P53675 AC098590.1-201ENST00000468126 897 ntBASIC30.56■■■□□ 2.48
CLTCL1P53675 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CLTCL1P53675 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.56■■■□□ 2.48
CLTCL1P53675 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CLTCL1P53675 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CLTCL1P53675 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CLTCL1P53675 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.55■■■□□ 2.48
CLTCL1P53675 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.55■■■□□ 2.48
CLTCL1P53675 ITM2C-210ENST00000620962 501 ntBASIC30.55■■■□□ 2.48
CLTCL1P53675 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC30.55■■■□□ 2.48
CLTCL1P53675 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC30.55■■■□□ 2.48
CLTCL1P53675 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC30.55■■■□□ 2.48
CLTCL1P53675 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CLTCL1P53675 AC008687.6-201ENST00000596318 630 ntBASIC30.55■■■□□ 2.48
CLTCL1P53675 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CLTCL1P53675 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CLTCL1P53675 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CLTCL1P53675 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CLTCL1P53675 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CLTCL1P53675 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CLTCL1P53675 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.54■■■□□ 2.48
CLTCL1P53675 AC091874.3-201ENST00000512672 1195 ntBASIC30.54■■■□□ 2.48
CLTCL1P53675 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CLTCL1P53675 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CLTCL1P53675 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CLTCL1P53675 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CLTCL1P53675 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CLTCL1P53675 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLTCL1P53675 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CLTCL1P53675 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLTCL1P53675 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC30.52■■■□□ 2.48
CLTCL1P53675 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC30.52■■■□□ 2.48
CLTCL1P53675 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC30.52■■■□□ 2.48
CLTCL1P53675 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CLTCL1P53675 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
CLTCL1P53675 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLTCL1P53675 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLTCL1P53675 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CLTCL1P53675 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CLTCL1P53675 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLTCL1P53675 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.51■■■□□ 2.48
CLTCL1P53675 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC30.51■■■□□ 2.48
CLTCL1P53675 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
CLTCL1P53675 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC30.51■■■□□ 2.48
CLTCL1P53675 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC30.51■■■□□ 2.47
CLTCL1P53675 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CLTCL1P53675 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC30.51■■■□□ 2.47
CLTCL1P53675 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CLTCL1P53675 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CLTCL1P53675 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CLTCL1P53675 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CLTCL1P53675 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CLTCL1P53675 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CLTCL1P53675 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CLTCL1P53675 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
CLTCL1P53675 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CLTCL1P53675 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.5■■■□□ 2.47
CLTCL1P53675 AC091799.1-201ENST00000422823 811 ntBASIC30.5■■■□□ 2.47
CLTCL1P53675 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.5■■■□□ 2.47
CLTCL1P53675 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.5■■■□□ 2.47
CLTCL1P53675 AC008694.1-202ENST00000636953 945 ntBASIC30.5■■■□□ 2.47
CLTCL1P53675 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
CLTCL1P53675 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC30.49■■■□□ 2.47
CLTCL1P53675 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.49■■■□□ 2.47
CLTCL1P53675 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CLTCL1P53675 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CLTCL1P53675 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
CLTCL1P53675 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
CLTCL1P53675 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CLTCL1P53675 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC30.49■■■□□ 2.47
CLTCL1P53675 FAM99A-202ENST00000538190 1989 ntBASIC30.48■■■□□ 2.47
CLTCL1P53675 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CLTCL1P53675 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC30.48■■■□□ 2.47
CLTCL1P53675 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC30.48■■■□□ 2.47
CLTCL1P53675 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CLTCL1P53675 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CLTCL1P53675 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC30.48■■■□□ 2.47
CLTCL1P53675 PRORSD1P-201ENST00000295112 541 ntBASIC30.47■■■□□ 2.47
CLTCL1P53675 FAM201B-201ENST00000458407 597 ntBASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms