Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.61■□□□□ 0.73
RNF144AP50876 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF144AP50876 AC244015.2-201ENST00000616358 1861 ntBASIC19.61■□□□□ 0.73
RNF144AP50876 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF144AP50876 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
RNF144AP50876 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF144AP50876 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RNF144AP50876 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RNF144AP50876 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF144AP50876 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF144AP50876 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF144AP50876 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF144AP50876 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF144AP50876 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF144AP50876 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF144AP50876 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF144AP50876 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF144AP50876 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF144AP50876 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.6■□□□□ 0.73
RNF144AP50876 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF144AP50876 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF144AP50876 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF144AP50876 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF144AP50876 ZNRF2P3-201ENST00000424200 374 ntBASIC19.59■□□□□ 0.73
RNF144AP50876 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF144AP50876 AC012414.1-201ENST00000556676 535 ntBASIC19.59■□□□□ 0.73
RNF144AP50876 AL034346.1-201ENST00000568244 1277 ntBASIC19.59■□□□□ 0.73
RNF144AP50876 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF144AP50876 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF144AP50876 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF144AP50876 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF144AP50876 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF144AP50876 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF144AP50876 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF144AP50876 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF144AP50876 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF144AP50876 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF144AP50876 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF144AP50876 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF144AP50876 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RNF144AP50876 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF144AP50876 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF144AP50876 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF144AP50876 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF144AP50876 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF144AP50876 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.58■□□□□ 0.72
RNF144AP50876 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF144AP50876 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF144AP50876 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF144AP50876 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF144AP50876 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF144AP50876 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF144AP50876 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF144AP50876 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF144AP50876 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF144AP50876 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF144AP50876 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF144AP50876 BX005040.4-201ENST00000637145 1518 ntBASIC19.57■□□□□ 0.72
RNF144AP50876 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF144AP50876 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF144AP50876 IRS3P-201ENST00000223076 1006 ntBASIC19.57■□□□□ 0.72
RNF144AP50876 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF144AP50876 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF144AP50876 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF144AP50876 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF144AP50876 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF144AP50876 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF144AP50876 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF144AP50876 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF144AP50876 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF144AP50876 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF144AP50876 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF144AP50876 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF144AP50876 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF144AP50876 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF144AP50876 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF144AP50876 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RNF144AP50876 AC104564.3-201ENST00000582367 638 ntBASIC19.55■□□□□ 0.72
RNF144AP50876 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF144AP50876 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF144AP50876 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF144AP50876 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF144AP50876 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms