Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLC1A6P48664 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A6P48664 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A6P48664 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A6P48664 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A6P48664 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC1A6P48664 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A6P48664 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A6P48664 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A6P48664 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC1A6P48664 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC1A6P48664 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC1A6P48664 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC1A6P48664 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC1A6P48664 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC1A6P48664 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SLC1A6P48664 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A6P48664 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC1A6P48664 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.77■□□□□ 0.91
SLC1A6P48664 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
SLC1A6P48664 AP004607.7-201ENST00000527152 1677 ntBASIC20.77■□□□□ 0.91
SLC1A6P48664 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC1A6P48664 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SLC1A6P48664 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A6P48664 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SLC1A6P48664 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A6P48664 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC1A6P48664 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SLC1A6P48664 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC1A6P48664 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A6P48664 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A6P48664 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A6P48664 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SLC1A6P48664 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SLC1A6P48664 AC009299.2-201ENST00000482477 511 ntBASIC20.76■□□□□ 0.91
SLC1A6P48664 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A6P48664 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A6P48664 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC1A6P48664 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A6P48664 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A6P48664 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.75■□□□□ 0.91
SLC1A6P48664 AC010525.1-201ENST00000585559 441 ntBASIC20.75■□□□□ 0.91
SLC1A6P48664 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A6P48664 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A6P48664 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SLC1A6P48664 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A6P48664 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SLC1A6P48664 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A6P48664 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLC1A6P48664 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A6P48664 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A6P48664 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A6P48664 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A6P48664 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC1A6P48664 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A6P48664 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A6P48664 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC1A6P48664 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC1A6P48664 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC1A6P48664 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A6P48664 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SLC1A6P48664 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC1A6P48664 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC1A6P48664 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC1A6P48664 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A6P48664 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SLC1A6P48664 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A6P48664 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A6P48664 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SLC1A6P48664 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A6P48664 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A6P48664 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A6P48664 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SLC1A6P48664 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A6P48664 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC1A6P48664 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC1A6P48664 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SLC1A6P48664 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
SLC1A6P48664 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
SLC1A6P48664 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC1A6P48664 RARRES2P1-201ENST00000474487 481 ntBASIC20.72■□□□□ 0.91
SLC1A6P48664 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 AC006128.1-201ENST00000624704 1661 ntBASIC20.72■□□□□ 0.91
SLC1A6P48664 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 GABARAPL3-202ENST00000624044 1851 ntBASIC20.72■□□□□ 0.91
SLC1A6P48664 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A6P48664 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SLC1A6P48664 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A6P48664 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A6P48664 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms