Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CBX5P45973 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX5P45973 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CBX5P45973 AL031848.2-201ENST00000607670 837 ntBASIC18.11■□□□□ 0.49
CBX5P45973 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CBX5P45973 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CBX5P45973 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX5P45973 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX5P45973 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX5P45973 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CBX5P45973 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX5P45973 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX5P45973 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX5P45973 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.1■□□□□ 0.49
CBX5P45973 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX5P45973 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX5P45973 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
CBX5P45973 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX5P45973 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.1■□□□□ 0.49
CBX5P45973 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX5P45973 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CBX5P45973 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX5P45973 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX5P45973 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX5P45973 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX5P45973 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CBX5P45973 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX5P45973 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX5P45973 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX5P45973 OR7E47P-201ENST00000546390 1422 ntBASIC18.09■□□□□ 0.49
CBX5P45973 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX5P45973 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX5P45973 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.09■□□□□ 0.49
CBX5P45973 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CBX5P45973 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX5P45973 AL031602.1-201ENST00000633169 911 ntBASIC18.09■□□□□ 0.49
CBX5P45973 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CBX5P45973 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CBX5P45973 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX5P45973 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX5P45973 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
CBX5P45973 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX5P45973 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.09■□□□□ 0.49
CBX5P45973 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.08■□□□□ 0.49
CBX5P45973 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CBX5P45973 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CBX5P45973 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.08■□□□□ 0.49
CBX5P45973 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.08■□□□□ 0.49
CBX5P45973 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.08■□□□□ 0.49
CBX5P45973 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CBX5P45973 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.08■□□□□ 0.48
CBX5P45973 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CBX5P45973 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CBX5P45973 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.08■□□□□ 0.48
CBX5P45973 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX5P45973 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX5P45973 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CBX5P45973 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX5P45973 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX5P45973 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX5P45973 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX5P45973 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.08■□□□□ 0.48
CBX5P45973 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 KRT8P33-201ENST00000508125 1423 ntBASIC18.07■□□□□ 0.48
CBX5P45973 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CBX5P45973 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX5P45973 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX5P45973 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.07■□□□□ 0.48
CBX5P45973 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX5P45973 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX5P45973 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX5P45973 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.07■□□□□ 0.48
CBX5P45973 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX5P45973 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX5P45973 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX5P45973 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CBX5P45973 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.06■□□□□ 0.48
CBX5P45973 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.06■□□□□ 0.48
CBX5P45973 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX5P45973 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CBX5P45973 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CBX5P45973 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX5P45973 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX5P45973 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CBX5P45973 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CBX5P45973 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CBX5P45973 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CBX5P45973 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CBX5P45973 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms