Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CEACAM3P40198 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 AC003102.1-202ENST00000563394 1796 ntBASIC17.21■□□□□ 0.35
CEACAM3P40198 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.21■□□□□ 0.35
CEACAM3P40198 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.21■□□□□ 0.35
CEACAM3P40198 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.21■□□□□ 0.35
CEACAM3P40198 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.21■□□□□ 0.35
CEACAM3P40198 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.21■□□□□ 0.35
CEACAM3P40198 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.21■□□□□ 0.35
CEACAM3P40198 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CEACAM3P40198 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CEACAM3P40198 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CEACAM3P40198 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEACAM3P40198 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.2■□□□□ 0.34
CEACAM3P40198 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CEACAM3P40198 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.2■□□□□ 0.34
CEACAM3P40198 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CEACAM3P40198 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.2■□□□□ 0.34
CEACAM3P40198 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.2■□□□□ 0.34
CEACAM3P40198 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.2■□□□□ 0.34
CEACAM3P40198 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CEACAM3P40198 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CEACAM3P40198 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM3P40198 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.19■□□□□ 0.34
CEACAM3P40198 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CEACAM3P40198 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.19■□□□□ 0.34
CEACAM3P40198 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CEACAM3P40198 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.19■□□□□ 0.34
CEACAM3P40198 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 MIR935-201ENST00000401179 91 ntBASIC17.19■□□□□ 0.34
CEACAM3P40198 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.19■□□□□ 0.34
CEACAM3P40198 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.19■□□□□ 0.34
CEACAM3P40198 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.19■□□□□ 0.34
CEACAM3P40198 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.19■□□□□ 0.34
CEACAM3P40198 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.19■□□□□ 0.34
CEACAM3P40198 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CEACAM3P40198 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM3P40198 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.19■□□□□ 0.34
CEACAM3P40198 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CEACAM3P40198 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM3P40198 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CEACAM3P40198 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.18■□□□□ 0.34
CEACAM3P40198 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM3P40198 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM3P40198 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.18■□□□□ 0.34
CEACAM3P40198 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.18■□□□□ 0.34
CEACAM3P40198 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM3P40198 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.18■□□□□ 0.34
CEACAM3P40198 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.18■□□□□ 0.34
CEACAM3P40198 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.18■□□□□ 0.34
CEACAM3P40198 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM3P40198 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.18■□□□□ 0.34
CEACAM3P40198 AC053503.5-201ENST00000601508 636 ntBASIC17.18■□□□□ 0.34
CEACAM3P40198 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CEACAM3P40198 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM3P40198 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CEACAM3P40198 AL024507.2-201ENST00000606070 2574 ntBASIC17.18■□□□□ 0.34
CEACAM3P40198 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM3P40198 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.18■□□□□ 0.34
CEACAM3P40198 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM3P40198 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.17■□□□□ 0.34
CEACAM3P40198 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.17■□□□□ 0.34
CEACAM3P40198 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms