Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KRT20P35900 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT20P35900 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20■□□□□ 0.79
KRT20P35900 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20■□□□□ 0.79
KRT20P35900 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20■□□□□ 0.79
KRT20P35900 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20■□□□□ 0.79
KRT20P35900 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20■□□□□ 0.79
KRT20P35900 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20■□□□□ 0.79
KRT20P35900 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20■□□□□ 0.79
KRT20P35900 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KRT20P35900 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
KRT20P35900 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT20P35900 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT20P35900 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
KRT20P35900 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
KRT20P35900 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT20P35900 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.99■□□□□ 0.79
KRT20P35900 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT20P35900 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT20P35900 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT20P35900 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT20P35900 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT20P35900 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT20P35900 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT20P35900 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
KRT20P35900 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
KRT20P35900 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.98■□□□□ 0.79
KRT20P35900 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
KRT20P35900 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT20P35900 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT20P35900 AC105233.4-201ENST00000642045 216 ntBASIC19.98■□□□□ 0.79
KRT20P35900 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.98■□□□□ 0.79
KRT20P35900 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT20P35900 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT20P35900 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT20P35900 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT20P35900 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT20P35900 MIR572-201ENST00000384983 95 ntBASIC19.97■□□□□ 0.79
KRT20P35900 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT20P35900 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT20P35900 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
KRT20P35900 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT20P35900 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT20P35900 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT20P35900 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT20P35900 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT20P35900 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT20P35900 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT20P35900 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT20P35900 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT20P35900 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT20P35900 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
KRT20P35900 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT20P35900 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT20P35900 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.95■□□□□ 0.78
KRT20P35900 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT20P35900 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT20P35900 IRS3P-201ENST00000223076 1006 ntBASIC19.95■□□□□ 0.78
KRT20P35900 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
KRT20P35900 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT20P35900 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT20P35900 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT20P35900 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT20P35900 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT20P35900 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT20P35900 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms