Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A4P31645 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC6A4P31645 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A4P31645 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC6A4P31645 C11orf96-202ENST00000528572 1834 ntBASIC21.79■■□□□ 1.08
SLC6A4P31645 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.79■■□□□ 1.08
SLC6A4P31645 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SLC6A4P31645 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A4P31645 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SLC6A4P31645 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC6A4P31645 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A4P31645 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SLC6A4P31645 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A4P31645 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC6A4P31645 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A4P31645 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC6A4P31645 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC6A4P31645 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A4P31645 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC6A4P31645 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A4P31645 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC6A4P31645 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A4P31645 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A4P31645 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A4P31645 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A4P31645 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A4P31645 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A4P31645 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A4P31645 AC061975.6-201ENST00000579045 1553 ntBASIC21.78■■□□□ 1.08
SLC6A4P31645 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A4P31645 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SLC6A4P31645 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A4P31645 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A4P31645 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.77■■□□□ 1.08
SLC6A4P31645 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SLC6A4P31645 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A4P31645 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A4P31645 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SLC6A4P31645 DUX4L16-201ENST00000555130 1264 ntBASIC21.77■■□□□ 1.08
SLC6A4P31645 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A4P31645 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SLC6A4P31645 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A4P31645 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A4P31645 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A4P31645 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC6A4P31645 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC6A4P31645 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC6A4P31645 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC6A4P31645 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC6A4P31645 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC6A4P31645 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A4P31645 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
SLC6A4P31645 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.75■■□□□ 1.07
SLC6A4P31645 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 AC008175.2-201ENST00000612840 297 ntBASIC21.75■■□□□ 1.07
SLC6A4P31645 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC6A4P31645 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
SLC6A4P31645 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A4P31645 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A4P31645 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A4P31645 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.74■■□□□ 1.07
SLC6A4P31645 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.74■■□□□ 1.07
SLC6A4P31645 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
SLC6A4P31645 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.74■■□□□ 1.07
SLC6A4P31645 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A4P31645 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.74■■□□□ 1.07
SLC6A4P31645 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A4P31645 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A4P31645 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A4P31645 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A4P31645 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A4P31645 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A4P31645 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A4P31645 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC6A4P31645 POU5F1P4-201ENST00000413175 1085 ntBASIC21.73■■□□□ 1.07
SLC6A4P31645 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC6A4P31645 AC026185.1-201ENST00000445748 174 ntBASIC21.73■■□□□ 1.07
SLC6A4P31645 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A4P31645 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A4P31645 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC6A4P31645 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 942.3 ms