Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC233723.2-201ENST00000623798 2106 ntBASIC18.71■□□□□ 0.59
HOXC12P31275 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC12P31275 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HOXC12P31275 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HOXC12P31275 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC12P31275 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC12P31275 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC12P31275 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC12P31275 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC12P31275 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC12P31275 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC12P31275 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC12P31275 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.71■□□□□ 0.59
HOXC12P31275 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
HOXC12P31275 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC12P31275 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
HOXC12P31275 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.71■□□□□ 0.58
HOXC12P31275 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
HOXC12P31275 AC068473.5-201ENST00000616428 2072 ntBASIC18.7■□□□□ 0.58
HOXC12P31275 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC12P31275 AC080038.3-201ENST00000623346 1952 ntBASIC18.7■□□□□ 0.58
HOXC12P31275 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC12P31275 KRT19P1-201ENST00000405746 1186 ntBASIC18.7■□□□□ 0.58
HOXC12P31275 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC12P31275 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.7■□□□□ 0.58
HOXC12P31275 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC12P31275 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC12P31275 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXC12P31275 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXC12P31275 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC12P31275 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC12P31275 AC242852.2-201ENST00000615738 1807 ntBASIC18.7■□□□□ 0.58
HOXC12P31275 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC12P31275 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC12P31275 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HOXC12P31275 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
HOXC12P31275 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HOXC12P31275 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC12P31275 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC12P31275 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXC12P31275 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 AC092053.2-201ENST00000640557 1818 ntBASIC18.69■□□□□ 0.58
HOXC12P31275 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC12P31275 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC12P31275 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HOXC12P31275 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC12P31275 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC12P31275 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXC12P31275 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC12P31275 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HOXC12P31275 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC12P31275 AC066615.1-201ENST00000640911 628 ntBASIC18.68■□□□□ 0.58
HOXC12P31275 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC12P31275 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC12P31275 AC055733.4-201ENST00000638462 1354 ntBASIC18.68■□□□□ 0.58
HOXC12P31275 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC12P31275 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC12P31275 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC12P31275 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HOXC12P31275 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC12P31275 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC12P31275 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXC12P31275 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC12P31275 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC12P31275 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
HOXC12P31275 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC12P31275 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
HOXC12P31275 AC004854.2-201ENST00000608450 1441 ntBASIC18.66■□□□□ 0.58
HOXC12P31275 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 GUSBP5-202ENST00000510805 1989 ntBASIC18.66■□□□□ 0.58
HOXC12P31275 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms