Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TNFRSF8P28908 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.83■■□□□ 1.09
TNFRSF8P28908 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF8P28908 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.83■■□□□ 1.09
TNFRSF8P28908 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.83■■□□□ 1.09
TNFRSF8P28908 AC003102.1-202ENST00000563394 1796 ntBASIC21.83■■□□□ 1.09
TNFRSF8P28908 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.83■■□□□ 1.09
TNFRSF8P28908 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF8P28908 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF8P28908 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF8P28908 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.83■■□□□ 1.08
TNFRSF8P28908 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.83■■□□□ 1.08
TNFRSF8P28908 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.83■■□□□ 1.08
TNFRSF8P28908 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.82■■□□□ 1.08
TNFRSF8P28908 AFG3L1P-217ENST00000557444 2447 ntBASIC21.82■■□□□ 1.08
TNFRSF8P28908 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.82■■□□□ 1.08
TNFRSF8P28908 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 AC103724.3-201ENST00000564481 992 ntBASIC21.82■■□□□ 1.08
TNFRSF8P28908 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TNFRSF8P28908 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF8P28908 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.82■■□□□ 1.08
TNFRSF8P28908 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFRSF8P28908 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFRSF8P28908 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF8P28908 AC103834.1-201ENST00000520383 144 ntBASIC21.81■■□□□ 1.08
TNFRSF8P28908 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.81■■□□□ 1.08
TNFRSF8P28908 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF8P28908 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF8P28908 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF8P28908 AC027702.1-201ENST00000563810 1770 ntBASIC21.81■■□□□ 1.08
TNFRSF8P28908 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TNFRSF8P28908 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF8P28908 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFRSF8P28908 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TNFRSF8P28908 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TNFRSF8P28908 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF8P28908 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF8P28908 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF8P28908 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF8P28908 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF8P28908 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 AC068587.7-201ENST00000641602 218 ntBASIC21.8■■□□□ 1.08
TNFRSF8P28908 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.8■■□□□ 1.08
TNFRSF8P28908 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.8■■□□□ 1.08
TNFRSF8P28908 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF8P28908 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF8P28908 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF8P28908 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF8P28908 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF8P28908 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF8P28908 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF8P28908 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.79■■□□□ 1.08
TNFRSF8P28908 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.78■■□□□ 1.08
TNFRSF8P28908 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.78■■□□□ 1.08
TNFRSF8P28908 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 AL034346.1-201ENST00000568244 1277 ntBASIC21.78■■□□□ 1.08
TNFRSF8P28908 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TNFRSF8P28908 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TNFRSF8P28908 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
TNFRSF8P28908 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.78■■□□□ 1.08
TNFRSF8P28908 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.78■■□□□ 1.08
TNFRSF8P28908 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF8P28908 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF8P28908 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TNFRSF8P28908 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms