Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.71■□□□□ 0.91
VARSP26640 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 AC244015.2-201ENST00000616358 1861 ntBASIC20.71■□□□□ 0.91
VARSP26640 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
VARSP26640 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.7■□□□□ 0.9
VARSP26640 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.7■□□□□ 0.9
VARSP26640 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.7■□□□□ 0.9
VARSP26640 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.7■□□□□ 0.9
VARSP26640 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VARSP26640 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.7■□□□□ 0.9
VARSP26640 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VARSP26640 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.7■□□□□ 0.9
VARSP26640 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.69■□□□□ 0.9
VARSP26640 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VARSP26640 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.69■□□□□ 0.9
VARSP26640 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.69■□□□□ 0.9
VARSP26640 RARRES2P11-201ENST00000635158 484 ntBASIC20.69■□□□□ 0.9
VARSP26640 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VARSP26640 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VARSP26640 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
VARSP26640 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARSP26640 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VARSP26640 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
VARSP26640 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
VARSP26640 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.68■□□□□ 0.9
VARSP26640 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARSP26640 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.68■□□□□ 0.9
VARSP26640 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARSP26640 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.68■□□□□ 0.9
VARSP26640 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.68■□□□□ 0.9
VARSP26640 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.68■□□□□ 0.9
VARSP26640 AC105233.4-201ENST00000642045 216 ntBASIC20.68■□□□□ 0.9
VARSP26640 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARSP26640 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VARSP26640 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARSP26640 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VARSP26640 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
VARSP26640 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.67■□□□□ 0.9
VARSP26640 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARSP26640 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARSP26640 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARSP26640 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
VARSP26640 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.67■□□□□ 0.9
VARSP26640 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VARSP26640 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARSP26640 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
VARSP26640 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.67■□□□□ 0.9
VARSP26640 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.67■□□□□ 0.9
VARSP26640 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.67■□□□□ 0.9
VARSP26640 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VARSP26640 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARSP26640 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.67■□□□□ 0.9
VARSP26640 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARSP26640 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VARSP26640 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARSP26640 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.66■□□□□ 0.9
VARSP26640 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 MIR572-201ENST00000384983 95 ntBASIC20.66■□□□□ 0.9
VARSP26640 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.66■□□□□ 0.9
VARSP26640 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.66■□□□□ 0.9
VARSP26640 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.66■□□□□ 0.9
VARSP26640 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.66■□□□□ 0.9
VARSP26640 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.66■□□□□ 0.9
VARSP26640 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.66■□□□□ 0.9
VARSP26640 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.66■□□□□ 0.9
VARSP26640 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARSP26640 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VARSP26640 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VARSP26640 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VARSP26640 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.65■□□□□ 0.9
VARSP26640 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
VARSP26640 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms