Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.17■□□□□ 0.98
CCND1P24385 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.17■□□□□ 0.98
CCND1P24385 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCND1P24385 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.17■□□□□ 0.98
CCND1P24385 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.17■□□□□ 0.98
CCND1P24385 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.17■□□□□ 0.98
CCND1P24385 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCND1P24385 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCND1P24385 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCND1P24385 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.16■□□□□ 0.98
CCND1P24385 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCND1P24385 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.16■□□□□ 0.98
CCND1P24385 BX842568.3-201ENST00000418104 571 ntBASIC21.16■□□□□ 0.98
CCND1P24385 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.16■□□□□ 0.98
CCND1P24385 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CCND1P24385 PBX2P1-201ENST00000493219 1291 ntBASIC21.16■□□□□ 0.98
CCND1P24385 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.16■□□□□ 0.98
CCND1P24385 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCND1P24385 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.16■□□□□ 0.98
CCND1P24385 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.16■□□□□ 0.98
CCND1P24385 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.15■□□□□ 0.98
CCND1P24385 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCND1P24385 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCND1P24385 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.14■□□□□ 0.98
CCND1P24385 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CCND1P24385 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCND1P24385 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCND1P24385 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.14■□□□□ 0.97
CCND1P24385 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.14■□□□□ 0.97
CCND1P24385 SLC47A1P1-202ENST00000449666 945 ntBASIC21.14■□□□□ 0.97
CCND1P24385 AP005435.1-201ENST00000529293 1178 ntBASIC21.14■□□□□ 0.97
CCND1P24385 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.14■□□□□ 0.97
CCND1P24385 LINC01006-201ENST00000333319 2292 ntBASIC21.14■□□□□ 0.97
CCND1P24385 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.14■□□□□ 0.97
CCND1P24385 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.14■□□□□ 0.97
CCND1P24385 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCND1P24385 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
CCND1P24385 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CCND1P24385 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCND1P24385 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 EDA-201ENST00000338901 1233 ntBASIC21.13■□□□□ 0.97
CCND1P24385 AC110285.6-201ENST00000617652 491 ntBASIC21.13■□□□□ 0.97
CCND1P24385 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.13■□□□□ 0.97
CCND1P24385 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.13■□□□□ 0.97
CCND1P24385 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCND1P24385 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCND1P24385 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.12■□□□□ 0.97
CCND1P24385 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCND1P24385 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCND1P24385 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCND1P24385 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCND1P24385 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCND1P24385 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCND1P24385 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCND1P24385 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCND1P24385 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCND1P24385 AC133561.4-201ENST00000566112 224 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms