Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL1P22362 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL1P22362 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL1P22362 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL1P22362 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CCL1P22362 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL1P22362 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL1P22362 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL1P22362 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL1P22362 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL1P22362 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCL1P22362 AC099791.1-201ENST00000416440 715 ntBASIC18.22■□□□□ 0.51
CCL1P22362 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL1P22362 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL1P22362 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.22■□□□□ 0.51
CCL1P22362 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCL1P22362 AC008764.7-201ENST00000593779 1081 ntBASIC18.22■□□□□ 0.51
CCL1P22362 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.22■□□□□ 0.51
CCL1P22362 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL1P22362 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL1P22362 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL1P22362 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL1P22362 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL1P22362 AC005224.4-201ENST00000583262 1652 ntBASIC18.22■□□□□ 0.51
CCL1P22362 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL1P22362 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL1P22362 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCL1P22362 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL1P22362 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCL1P22362 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.21■□□□□ 0.51
CCL1P22362 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL1P22362 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CCL1P22362 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCL1P22362 AC106739.1-201ENST00000617035 715 ntBASIC18.21■□□□□ 0.51
CCL1P22362 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCL1P22362 AC105233.4-201ENST00000642045 216 ntBASIC18.21■□□□□ 0.51
CCL1P22362 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCL1P22362 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL1P22362 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCL1P22362 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL1P22362 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.21■□□□□ 0.51
CCL1P22362 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL1P22362 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCL1P22362 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL1P22362 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL1P22362 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.2■□□□□ 0.5
CCL1P22362 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCL1P22362 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCL1P22362 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCL1P22362 EDA-201ENST00000338901 1233 ntBASIC18.2■□□□□ 0.5
CCL1P22362 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL1P22362 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.2■□□□□ 0.5
CCL1P22362 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.2■□□□□ 0.5
CCL1P22362 TSPY26P-201ENST00000476365 1326 ntBASIC18.2■□□□□ 0.5
CCL1P22362 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL1P22362 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.19■□□□□ 0.5
CCL1P22362 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCL1P22362 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.19■□□□□ 0.5
CCL1P22362 AC096631.2-201ENST00000436136 790 ntBASIC18.19■□□□□ 0.5
CCL1P22362 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.19■□□□□ 0.5
CCL1P22362 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.19■□□□□ 0.5
CCL1P22362 AP001330.3-201ENST00000520123 633 ntBASIC18.19■□□□□ 0.5
CCL1P22362 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.19■□□□□ 0.5
CCL1P22362 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.19■□□□□ 0.5
CCL1P22362 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.19■□□□□ 0.5
CCL1P22362 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL1P22362 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.19■□□□□ 0.5
CCL1P22362 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.18■□□□□ 0.5
CCL1P22362 BX005040.4-201ENST00000637145 1518 ntBASIC18.18■□□□□ 0.5
CCL1P22362 AC008406.3-201ENST00000620001 1374 ntBASIC18.18■□□□□ 0.5
CCL1P22362 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCL1P22362 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.18■□□□□ 0.5
CCL1P22362 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.18■□□□□ 0.5
CCL1P22362 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL1P22362 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.18■□□□□ 0.5
CCL1P22362 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.18■□□□□ 0.5
CCL1P22362 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.18■□□□□ 0.5
CCL1P22362 PBX2P1-201ENST00000493219 1291 ntBASIC18.18■□□□□ 0.5
CCL1P22362 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms