Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.53■□□□□ 0.56
ATF1P18846 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF1P18846 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.53■□□□□ 0.56
ATF1P18846 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF1P18846 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATF1P18846 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ATF1P18846 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.53■□□□□ 0.56
ATF1P18846 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ATF1P18846 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF1P18846 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.52■□□□□ 0.56
ATF1P18846 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF1P18846 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATF1P18846 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ATF1P18846 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATF1P18846 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF1P18846 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF1P18846 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.52■□□□□ 0.56
ATF1P18846 AL512631.2-201ENST00000604634 923 ntBASIC18.52■□□□□ 0.56
ATF1P18846 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ATF1P18846 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.52■□□□□ 0.56
ATF1P18846 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATF1P18846 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ATF1P18846 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.52■□□□□ 0.55
ATF1P18846 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATF1P18846 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATF1P18846 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF1P18846 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF1P18846 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF1P18846 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.51■□□□□ 0.55
ATF1P18846 AL049796.1-201ENST00000565336 1766 ntBASIC18.51■□□□□ 0.55
ATF1P18846 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATF1P18846 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF1P18846 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF1P18846 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.51■□□□□ 0.55
ATF1P18846 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.51■□□□□ 0.55
ATF1P18846 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
ATF1P18846 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF1P18846 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATF1P18846 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.5■□□□□ 0.55
ATF1P18846 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.5■□□□□ 0.55
ATF1P18846 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 AC010141.3-201ENST00000456659 717 ntBASIC18.5■□□□□ 0.55
ATF1P18846 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.5■□□□□ 0.55
ATF1P18846 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.5■□□□□ 0.55
ATF1P18846 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ATF1P18846 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATF1P18846 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ATF1P18846 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATF1P18846 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.49■□□□□ 0.55
ATF1P18846 AC007952.6-201ENST00000573168 2673 ntBASIC18.49■□□□□ 0.55
ATF1P18846 AC003957.1-201ENST00000625108 2673 ntBASIC18.49■□□□□ 0.55
ATF1P18846 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ATF1P18846 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF1P18846 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATF1P18846 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.49■□□□□ 0.55
ATF1P18846 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.49■□□□□ 0.55
ATF1P18846 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF1P18846 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATF1P18846 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATF1P18846 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF1P18846 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
ATF1P18846 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF1P18846 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.49■□□□□ 0.55
ATF1P18846 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATF1P18846 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ATF1P18846 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ATF1P18846 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF1P18846 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF1P18846 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATF1P18846 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
ATF1P18846 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATF1P18846 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATF1P18846 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.48■□□□□ 0.55
ATF1P18846 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF1P18846 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.48■□□□□ 0.55
ATF1P18846 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.48■□□□□ 0.55
ATF1P18846 AC010525.1-201ENST00000585559 441 ntBASIC18.48■□□□□ 0.55
ATF1P18846 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATF1P18846 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF1P18846 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.48■□□□□ 0.55
ATF1P18846 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
ATF1P18846 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATF1P18846 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.48■□□□□ 0.55
ATF1P18846 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.48■□□□□ 0.55
ATF1P18846 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATF1P18846 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
ATF1P18846 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATF1P18846 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATF1P18846 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATF1P18846 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATF1P18846 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms