Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP3CBP16298 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP3CBP16298 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PPP3CBP16298 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.89■□□□□ 0.61
PPP3CBP16298 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.89■□□□□ 0.61
PPP3CBP16298 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PPP3CBP16298 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.88■□□□□ 0.61
PPP3CBP16298 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
PPP3CBP16298 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP3CBP16298 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP3CBP16298 AC006015.1-201ENST00000429970 570 ntBASIC18.88■□□□□ 0.61
PPP3CBP16298 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.88■□□□□ 0.61
PPP3CBP16298 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.88■□□□□ 0.61
PPP3CBP16298 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP3CBP16298 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.88■□□□□ 0.61
PPP3CBP16298 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PPP3CBP16298 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.88■□□□□ 0.61
PPP3CBP16298 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.88■□□□□ 0.61
PPP3CBP16298 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.88■□□□□ 0.61
PPP3CBP16298 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPP3CBP16298 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPP3CBP16298 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP3CBP16298 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP3CBP16298 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPP3CBP16298 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPP3CBP16298 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPP3CBP16298 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.87■□□□□ 0.61
PPP3CBP16298 KRT18P11-201ENST00000435214 1283 ntBASIC18.87■□□□□ 0.61
PPP3CBP16298 AC079089.2-201ENST00000531211 1277 ntBASIC18.87■□□□□ 0.61
PPP3CBP16298 LINC01960-201ENST00000563759 1884 ntBASIC18.87■□□□□ 0.61
PPP3CBP16298 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPP3CBP16298 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
PPP3CBP16298 AC073130.3-201ENST00000624389 2278 ntBASIC18.87■□□□□ 0.61
PPP3CBP16298 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.87■□□□□ 0.61
PPP3CBP16298 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.86■□□□□ 0.61
PPP3CBP16298 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PPP3CBP16298 AC005224.4-201ENST00000583262 1652 ntBASIC18.86■□□□□ 0.61
PPP3CBP16298 AC004854.2-201ENST00000608450 1441 ntBASIC18.86■□□□□ 0.61
PPP3CBP16298 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PPP3CBP16298 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.86■□□□□ 0.61
PPP3CBP16298 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.86■□□□□ 0.61
PPP3CBP16298 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.86■□□□□ 0.61
PPP3CBP16298 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PPP3CBP16298 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.86■□□□□ 0.61
PPP3CBP16298 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPP3CBP16298 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PPP3CBP16298 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PPP3CBP16298 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PPP3CBP16298 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PPP3CBP16298 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PPP3CBP16298 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PPP3CBP16298 AC092667.1-201ENST00000434301 2586 ntBASIC18.85■□□□□ 0.61
PPP3CBP16298 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.85■□□□□ 0.61
PPP3CBP16298 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.85■□□□□ 0.61
PPP3CBP16298 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PPP3CBP16298 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.85■□□□□ 0.61
PPP3CBP16298 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.85■□□□□ 0.61
PPP3CBP16298 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PPP3CBP16298 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PPP3CBP16298 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
PPP3CBP16298 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PPP3CBP16298 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.84■□□□□ 0.61
PPP3CBP16298 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PPP3CBP16298 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.84■□□□□ 0.61
PPP3CBP16298 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PPP3CBP16298 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PPP3CBP16298 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.84■□□□□ 0.61
PPP3CBP16298 ESRRAP2-201ENST00000418437 1549 ntBASIC18.84■□□□□ 0.61
PPP3CBP16298 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.84■□□□□ 0.61
PPP3CBP16298 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms