Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.43■□□□□ 0.7
NGFRP08138 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 AC005229.4-201ENST00000610085 2198 ntBASIC19.43■□□□□ 0.7
NGFRP08138 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
NGFRP08138 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFRP08138 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NGFRP08138 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.42■□□□□ 0.7
NGFRP08138 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.42■□□□□ 0.7
NGFRP08138 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.42■□□□□ 0.7
NGFRP08138 KRT18P14-201ENST00000534205 1250 ntBASIC19.42■□□□□ 0.7
NGFRP08138 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.42■□□□□ 0.7
NGFRP08138 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.42■□□□□ 0.7
NGFRP08138 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.42■□□□□ 0.7
NGFRP08138 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFRP08138 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.41■□□□□ 0.7
NGFRP08138 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.41■□□□□ 0.7
NGFRP08138 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.41■□□□□ 0.7
NGFRP08138 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.41■□□□□ 0.7
NGFRP08138 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NGFRP08138 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
NGFRP08138 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.4■□□□□ 0.7
NGFRP08138 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.4■□□□□ 0.7
NGFRP08138 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NGFRP08138 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NGFRP08138 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
NGFRP08138 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NGFRP08138 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NGFRP08138 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.4■□□□□ 0.7
NGFRP08138 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NGFRP08138 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.39■□□□□ 0.69
NGFRP08138 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.39■□□□□ 0.69
NGFRP08138 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.39■□□□□ 0.69
NGFRP08138 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NGFRP08138 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.39■□□□□ 0.69
NGFRP08138 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.39■□□□□ 0.69
NGFRP08138 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
NGFRP08138 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
NGFRP08138 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NGFRP08138 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.39■□□□□ 0.69
NGFRP08138 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.39■□□□□ 0.69
NGFRP08138 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.39■□□□□ 0.69
NGFRP08138 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NGFRP08138 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms