Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ERCC1P07992 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ERCC1P07992 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.66■□□□□ 0.58
ERCC1P07992 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.66■□□□□ 0.58
ERCC1P07992 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC1P07992 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ERCC1P07992 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC1P07992 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC1P07992 AC123595.1-201ENST00000440769 1046 ntBASIC18.66■□□□□ 0.58
ERCC1P07992 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC1P07992 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC1P07992 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC1P07992 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.66■□□□□ 0.58
ERCC1P07992 AC087623.3-201ENST00000607047 1098 ntBASIC18.66■□□□□ 0.58
ERCC1P07992 AC105233.4-201ENST00000642045 216 ntBASIC18.66■□□□□ 0.58
ERCC1P07992 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC1P07992 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC1P07992 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.66■□□□□ 0.58
ERCC1P07992 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC1P07992 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC1P07992 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.66■□□□□ 0.58
ERCC1P07992 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC1P07992 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.66■□□□□ 0.58
ERCC1P07992 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC1P07992 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ERCC1P07992 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC1P07992 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC1P07992 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC1P07992 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC1P07992 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC1P07992 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ERCC1P07992 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.65■□□□□ 0.58
ERCC1P07992 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC1P07992 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.65■□□□□ 0.58
ERCC1P07992 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.65■□□□□ 0.58
ERCC1P07992 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC1P07992 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.65■□□□□ 0.58
ERCC1P07992 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC1P07992 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ERCC1P07992 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC1P07992 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC1P07992 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC1P07992 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ERCC1P07992 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.64■□□□□ 0.57
ERCC1P07992 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.64■□□□□ 0.57
ERCC1P07992 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.64■□□□□ 0.57
ERCC1P07992 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.64■□□□□ 0.57
ERCC1P07992 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.64■□□□□ 0.57
ERCC1P07992 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ERCC1P07992 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC1P07992 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC1P07992 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC1P07992 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ERCC1P07992 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.63■□□□□ 0.57
ERCC1P07992 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC1P07992 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC1P07992 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC1P07992 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
ERCC1P07992 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC1P07992 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC1P07992 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ERCC1P07992 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.63■□□□□ 0.57
ERCC1P07992 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC1P07992 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC1P07992 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC1P07992 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC1P07992 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC1P07992 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ERCC1P07992 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC1P07992 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC1P07992 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ERCC1P07992 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.62■□□□□ 0.57
ERCC1P07992 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC1P07992 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.62■□□□□ 0.57
ERCC1P07992 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC1P07992 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.62■□□□□ 0.57
ERCC1P07992 LINC02228-203ENST00000641970 1355 ntBASIC18.62■□□□□ 0.57
ERCC1P07992 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC1P07992 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC1P07992 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms