Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGN1P05114 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HMGN1P05114 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGN1P05114 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGN1P05114 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGN1P05114 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGN1P05114 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HMGN1P05114 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
HMGN1P05114 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGN1P05114 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGN1P05114 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HMGN1P05114 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HMGN1P05114 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 AP005435.1-201ENST00000529293 1178 ntBASIC19.09■□□□□ 0.65
HMGN1P05114 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HMGN1P05114 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HMGN1P05114 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HMGN1P05114 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGN1P05114 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGN1P05114 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGN1P05114 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGN1P05114 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGN1P05114 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
HMGN1P05114 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGN1P05114 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGN1P05114 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGN1P05114 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGN1P05114 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGN1P05114 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGN1P05114 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
HMGN1P05114 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGN1P05114 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGN1P05114 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGN1P05114 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGN1P05114 AL138724.1-201ENST00000606771 1088 ntBASIC19.08■□□□□ 0.64
HMGN1P05114 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HMGN1P05114 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGN1P05114 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGN1P05114 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGN1P05114 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGN1P05114 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGN1P05114 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HMGN1P05114 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGN1P05114 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HMGN1P05114 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HMGN1P05114 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGN1P05114 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGN1P05114 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGN1P05114 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGN1P05114 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGN1P05114 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGN1P05114 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGN1P05114 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGN1P05114 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGN1P05114 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGN1P05114 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGN1P05114 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGN1P05114 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
HMGN1P05114 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGN1P05114 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGN1P05114 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGN1P05114 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGN1P05114 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGN1P05114 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HMGN1P05114 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGN1P05114 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGN1P05114 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGN1P05114 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HMGN1P05114 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGN1P05114 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HMGN1P05114 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGN1P05114 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms