Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN1O95832 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN1O95832 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN1O95832 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLDN1O95832 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CLDN1O95832 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN1O95832 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN1O95832 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN1O95832 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN1O95832 AC138907.5-202ENST00000569484 235 ntBASIC18.86■□□□□ 0.61
CLDN1O95832 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN1O95832 AC008694.1-202ENST00000636953 945 ntBASIC18.86■□□□□ 0.61
CLDN1O95832 AC073648.6-201ENST00000641589 218 ntBASIC18.86■□□□□ 0.61
CLDN1O95832 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN1O95832 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN1O95832 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.85■□□□□ 0.61
CLDN1O95832 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN1O95832 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 AC007322.4-201ENST00000509611 723 ntBASIC18.85■□□□□ 0.61
CLDN1O95832 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN1O95832 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN1O95832 AC073912.3-201ENST00000624414 853 ntBASIC18.85■□□□□ 0.61
CLDN1O95832 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN1O95832 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN1O95832 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN1O95832 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN1O95832 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN1O95832 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN1O95832 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN1O95832 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN1O95832 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLDN1O95832 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN1O95832 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CLDN1O95832 AC026366.1-201ENST00000488803 879 ntBASIC18.84■□□□□ 0.61
CLDN1O95832 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN1O95832 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.84■□□□□ 0.61
CLDN1O95832 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN1O95832 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN1O95832 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN1O95832 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN1O95832 AC069236.1-201ENST00000604339 616 ntBASIC18.84■□□□□ 0.61
CLDN1O95832 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN1O95832 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CLDN1O95832 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN1O95832 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN1O95832 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN1O95832 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLDN1O95832 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CLDN1O95832 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CLDN1O95832 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN1O95832 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN1O95832 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN1O95832 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN1O95832 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN1O95832 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN1O95832 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CLDN1O95832 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN1O95832 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN1O95832 AC091874.3-201ENST00000512672 1195 ntBASIC18.83■□□□□ 0.6
CLDN1O95832 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN1O95832 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.83■□□□□ 0.6
CLDN1O95832 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN1O95832 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN1O95832 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN1O95832 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN1O95832 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN1O95832 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN1O95832 AC055733.4-201ENST00000638462 1354 ntBASIC18.82■□□□□ 0.6
CLDN1O95832 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN1O95832 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN1O95832 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN1O95832 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN1O95832 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLDN1O95832 UBE2SP1-201ENST00000450587 669 ntBASIC18.82■□□□□ 0.6
CLDN1O95832 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.82■□□□□ 0.6
CLDN1O95832 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLDN1O95832 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN1O95832 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN1O95832 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN1O95832 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN1O95832 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN1O95832 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN1O95832 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLDN1O95832 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN1O95832 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms