Protein–RNA interactions for Protein: O95704

APBB3, Amyloid-beta A4 precursor protein-binding family B member 3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3O95704 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.27■■□□□ 1
APBB3O95704 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.27■■□□□ 1
APBB3O95704 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.27■■□□□ 1
APBB3O95704 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
APBB3O95704 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APBB3O95704 GCSHP5-201ENST00000443090 522 ntBASIC21.27■■□□□ 1
APBB3O95704 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
APBB3O95704 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.27■■□□□ 1
APBB3O95704 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.27■■□□□ 1
APBB3O95704 AC010980.2-201ENST00000587099 1412 ntBASIC21.27■■□□□ 1
APBB3O95704 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
APBB3O95704 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
APBB3O95704 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
APBB3O95704 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.26■□□□□ 0.99
APBB3O95704 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
APBB3O95704 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.26■□□□□ 0.99
APBB3O95704 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.26■□□□□ 0.99
APBB3O95704 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
APBB3O95704 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.26■□□□□ 0.99
APBB3O95704 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.26■□□□□ 0.99
APBB3O95704 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APBB3O95704 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.25■□□□□ 0.99
APBB3O95704 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.25■□□□□ 0.99
APBB3O95704 AC006058.3-201ENST00000606217 1069 ntBASIC21.25■□□□□ 0.99
APBB3O95704 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APBB3O95704 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.25■□□□□ 0.99
APBB3O95704 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.24■□□□□ 0.99
APBB3O95704 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.24■□□□□ 0.99
APBB3O95704 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.24■□□□□ 0.99
APBB3O95704 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
APBB3O95704 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
APBB3O95704 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.24■□□□□ 0.99
APBB3O95704 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
APBB3O95704 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.24■□□□□ 0.99
APBB3O95704 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.24■□□□□ 0.99
APBB3O95704 AC243732.1-201ENST00000612648 864 ntBASIC21.24■□□□□ 0.99
APBB3O95704 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APBB3O95704 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
APBB3O95704 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
APBB3O95704 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APBB3O95704 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.23■□□□□ 0.99
APBB3O95704 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.23■□□□□ 0.99
APBB3O95704 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
APBB3O95704 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.23■□□□□ 0.99
APBB3O95704 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.23■□□□□ 0.99
APBB3O95704 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.23■□□□□ 0.99
APBB3O95704 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APBB3O95704 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.23■□□□□ 0.99
APBB3O95704 AC087742.1-201ENST00000575880 1738 ntBASIC21.23■□□□□ 0.99
APBB3O95704 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.22■□□□□ 0.99
APBB3O95704 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
APBB3O95704 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.22■□□□□ 0.99
APBB3O95704 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.22■□□□□ 0.99
APBB3O95704 AL158047.1-201ENST00000445918 881 ntBASIC21.22■□□□□ 0.99
APBB3O95704 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.22■□□□□ 0.99
APBB3O95704 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.22■□□□□ 0.99
APBB3O95704 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.22■□□□□ 0.99
APBB3O95704 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.22■□□□□ 0.99
APBB3O95704 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.22■□□□□ 0.99
APBB3O95704 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.22■□□□□ 0.99
APBB3O95704 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.22■□□□□ 0.99
APBB3O95704 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
APBB3O95704 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APBB3O95704 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms