Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.24■■□□□ 1.31
CSDE1O75534 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
CSDE1O75534 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CSDE1O75534 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CSDE1O75534 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.24■■□□□ 1.31
CSDE1O75534 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CSDE1O75534 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSDE1O75534 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.24■■□□□ 1.31
CSDE1O75534 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CSDE1O75534 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.23■■□□□ 1.31
CSDE1O75534 AC083906.2-201ENST00000511578 360 ntBASIC23.23■■□□□ 1.31
CSDE1O75534 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.23■■□□□ 1.31
CSDE1O75534 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.23■■□□□ 1.31
CSDE1O75534 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.23■■□□□ 1.31
CSDE1O75534 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CSDE1O75534 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.23■■□□□ 1.31
CSDE1O75534 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.23■■□□□ 1.31
CSDE1O75534 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSDE1O75534 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
CSDE1O75534 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSDE1O75534 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.22■■□□□ 1.31
CSDE1O75534 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CSDE1O75534 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSDE1O75534 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.22■■□□□ 1.31
CSDE1O75534 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSDE1O75534 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.22■■□□□ 1.31
CSDE1O75534 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.22■■□□□ 1.31
CSDE1O75534 AC061975.6-201ENST00000579045 1553 ntBASIC23.22■■□□□ 1.31
CSDE1O75534 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CSDE1O75534 FAM99A-202ENST00000538190 1989 ntBASIC23.21■■□□□ 1.31
CSDE1O75534 AC068473.5-201ENST00000616428 2072 ntBASIC23.21■■□□□ 1.31
CSDE1O75534 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CSDE1O75534 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CSDE1O75534 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.21■■□□□ 1.31
CSDE1O75534 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CSDE1O75534 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CSDE1O75534 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CSDE1O75534 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.21■■□□□ 1.31
CSDE1O75534 AC233723.2-201ENST00000623798 2106 ntBASIC23.21■■□□□ 1.31
CSDE1O75534 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CSDE1O75534 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CSDE1O75534 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.2■■□□□ 1.3
CSDE1O75534 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CSDE1O75534 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.2■■□□□ 1.3
CSDE1O75534 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSDE1O75534 AC079834.2-201ENST00000609776 1949 ntBASIC23.2■■□□□ 1.3
CSDE1O75534 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CSDE1O75534 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSDE1O75534 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.2■■□□□ 1.3
CSDE1O75534 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.19■■□□□ 1.3
CSDE1O75534 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.19■■□□□ 1.3
CSDE1O75534 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSDE1O75534 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSDE1O75534 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.19■■□□□ 1.3
CSDE1O75534 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.19■■□□□ 1.3
CSDE1O75534 TERF1P5-201ENST00000477545 1207 ntBASIC23.19■■□□□ 1.3
CSDE1O75534 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.19■■□□□ 1.3
CSDE1O75534 AL121832.2-201ENST00000610979 668 ntBASIC23.19■■□□□ 1.3
CSDE1O75534 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSDE1O75534 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSDE1O75534 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSDE1O75534 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.18■■□□□ 1.3
CSDE1O75534 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
CSDE1O75534 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CSDE1O75534 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.18■■□□□ 1.3
CSDE1O75534 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.18■■□□□ 1.3
CSDE1O75534 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.18■■□□□ 1.3
CSDE1O75534 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSDE1O75534 AC008175.2-201ENST00000612840 297 ntBASIC23.18■■□□□ 1.3
CSDE1O75534 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
CSDE1O75534 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSDE1O75534 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSDE1O75534 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSDE1O75534 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.17■■□□□ 1.3
CSDE1O75534 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.17■■□□□ 1.3
CSDE1O75534 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CSDE1O75534 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSDE1O75534 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSDE1O75534 GUSBP6-202ENST00000438529 1198 ntBASIC23.17■■□□□ 1.3
CSDE1O75534 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.17■■□□□ 1.3
CSDE1O75534 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.17■■□□□ 1.3
CSDE1O75534 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.17■■□□□ 1.3
CSDE1O75534 SLC7A5P1-201ENST00000568957 537 ntBASIC23.17■■□□□ 1.3
CSDE1O75534 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CSDE1O75534 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.17■■□□□ 1.3
CSDE1O75534 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.16■■□□□ 1.3
CSDE1O75534 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.16■■□□□ 1.3
CSDE1O75534 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.16■■□□□ 1.3
CSDE1O75534 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.16■■□□□ 1.3
CSDE1O75534 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSDE1O75534 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSDE1O75534 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms