Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF40O75150 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF40O75150 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.7■■□□□ 1.22
RNF40O75150 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF40O75150 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF40O75150 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF40O75150 KRT18P14-201ENST00000534205 1250 ntBASIC22.69■■□□□ 1.22
RNF40O75150 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF40O75150 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF40O75150 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF40O75150 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
RNF40O75150 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
RNF40O75150 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF40O75150 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.69■■□□□ 1.22
RNF40O75150 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF40O75150 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RNF40O75150 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF40O75150 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF40O75150 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF40O75150 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RNF40O75150 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF40O75150 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
RNF40O75150 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF40O75150 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.68■■□□□ 1.22
RNF40O75150 NTF6G-201ENST00000591094 616 ntBASIC22.68■■□□□ 1.22
RNF40O75150 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
RNF40O75150 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF40O75150 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
RNF40O75150 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF40O75150 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF40O75150 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF40O75150 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF40O75150 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF40O75150 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF40O75150 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF40O75150 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF40O75150 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF40O75150 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF40O75150 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF40O75150 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF40O75150 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF40O75150 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RNF40O75150 LINC02228-203ENST00000641970 1355 ntBASIC22.66■■□□□ 1.22
RNF40O75150 AC087742.1-201ENST00000575880 1738 ntBASIC22.66■■□□□ 1.22
RNF40O75150 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
RNF40O75150 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF40O75150 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF40O75150 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF40O75150 DUX4L4-201ENST00000566884 1269 ntBASIC22.66■■□□□ 1.22
RNF40O75150 TERF1P2-201ENST00000583350 1212 ntBASIC22.66■■□□□ 1.22
RNF40O75150 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RNF40O75150 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF40O75150 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF40O75150 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF40O75150 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF40O75150 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF40O75150 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF40O75150 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF40O75150 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF40O75150 FP325331.1-202ENST00000623531 1380 ntBASIC22.65■■□□□ 1.22
RNF40O75150 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF40O75150 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
RNF40O75150 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF40O75150 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RNF40O75150 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RNF40O75150 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.65■■□□□ 1.22
RNF40O75150 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF40O75150 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF40O75150 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RNF40O75150 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF40O75150 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF40O75150 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF40O75150 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF40O75150 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF40O75150 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RNF40O75150 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RNF40O75150 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.64■■□□□ 1.22
RNF40O75150 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
RNF40O75150 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF40O75150 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF40O75150 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF40O75150 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF40O75150 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF40O75150 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF40O75150 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF40O75150 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF40O75150 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RNF40O75150 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF40O75150 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RNF40O75150 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF40O75150 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF40O75150 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF40O75150 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF40O75150 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
RNF40O75150 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF40O75150 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF40O75150 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF40O75150 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RNF40O75150 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF40O75150 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms