Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CTNND1O60716 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CTNND1O60716 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.83■■□□□ 1.57
CTNND1O60716 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.83■■□□□ 1.57
CTNND1O60716 MYC-209ENST00000641252 345 ntBASIC24.83■■□□□ 1.57
CTNND1O60716 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CTNND1O60716 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CTNND1O60716 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CTNND1O60716 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CTNND1O60716 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CTNND1O60716 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.82■■□□□ 1.56
CTNND1O60716 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.82■■□□□ 1.56
CTNND1O60716 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CTNND1O60716 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CTNND1O60716 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CTNND1O60716 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CTNND1O60716 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.82■■□□□ 1.56
CTNND1O60716 AC008687.6-201ENST00000596318 630 ntBASIC24.82■■□□□ 1.56
CTNND1O60716 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.82■■□□□ 1.56
CTNND1O60716 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.82■■□□□ 1.56
CTNND1O60716 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CTNND1O60716 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CTNND1O60716 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTNND1O60716 AC010980.2-201ENST00000587099 1412 ntBASIC24.81■■□□□ 1.56
CTNND1O60716 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CTNND1O60716 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTNND1O60716 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.81■■□□□ 1.56
CTNND1O60716 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.81■■□□□ 1.56
CTNND1O60716 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTNND1O60716 AC083880.1-201ENST00000608266 535 ntBASIC24.81■■□□□ 1.56
CTNND1O60716 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CTNND1O60716 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTNND1O60716 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.81■■□□□ 1.56
CTNND1O60716 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTNND1O60716 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CTNND1O60716 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTNND1O60716 AC061975.6-201ENST00000579045 1553 ntBASIC24.8■■□□□ 1.56
CTNND1O60716 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTNND1O60716 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTNND1O60716 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.8■■□□□ 1.56
CTNND1O60716 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTNND1O60716 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.8■■□□□ 1.56
CTNND1O60716 AC097658.1-201ENST00000475555 843 ntBASIC24.8■■□□□ 1.56
CTNND1O60716 RARRES2P4-201ENST00000514074 484 ntBASIC24.8■■□□□ 1.56
CTNND1O60716 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.8■■□□□ 1.56
CTNND1O60716 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTNND1O60716 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CTNND1O60716 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CTNND1O60716 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.79■■□□□ 1.56
CTNND1O60716 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CTNND1O60716 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CTNND1O60716 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CTNND1O60716 KRT18P29-201ENST00000397031 1267 ntBASIC24.79■■□□□ 1.56
CTNND1O60716 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CTNND1O60716 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CTNND1O60716 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CTNND1O60716 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CTNND1O60716 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.78■■□□□ 1.56
CTNND1O60716 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTNND1O60716 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTNND1O60716 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.78■■□□□ 1.56
CTNND1O60716 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTNND1O60716 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTNND1O60716 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTNND1O60716 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.78■■□□□ 1.56
CTNND1O60716 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.78■■□□□ 1.56
CTNND1O60716 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
CTNND1O60716 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.78■■□□□ 1.56
CTNND1O60716 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.78■■□□□ 1.56
CTNND1O60716 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.78■■□□□ 1.56
CTNND1O60716 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
CTNND1O60716 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CTNND1O60716 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.78■■□□□ 1.56
CTNND1O60716 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CTNND1O60716 AC003102.1-202ENST00000563394 1796 ntBASIC24.77■■□□□ 1.56
CTNND1O60716 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTNND1O60716 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CTNND1O60716 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CTNND1O60716 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTNND1O60716 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.77■■□□□ 1.56
CTNND1O60716 AC091874.3-201ENST00000512672 1195 ntBASIC24.77■■□□□ 1.56
CTNND1O60716 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
CTNND1O60716 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.77■■□□□ 1.56
CTNND1O60716 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTNND1O60716 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.77■■□□□ 1.56
CTNND1O60716 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.77■■□□□ 1.56
CTNND1O60716 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CTNND1O60716 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.76■■□□□ 1.55
CTNND1O60716 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CTNND1O60716 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTNND1O60716 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTNND1O60716 PRORSD1P-201ENST00000295112 541 ntBASIC24.76■■□□□ 1.55
CTNND1O60716 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CTNND1O60716 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTNND1O60716 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.76■■□□□ 1.55
CTNND1O60716 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.76■■□□□ 1.55
CTNND1O60716 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.76■■□□□ 1.55
CTNND1O60716 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.76■■□□□ 1.55
CTNND1O60716 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.76■■□□□ 1.55
CTNND1O60716 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms