Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.82■■□□□ 1.08
TSPAN3O60637 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.82■■□□□ 1.08
TSPAN3O60637 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.82■■□□□ 1.08
TSPAN3O60637 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN3O60637 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN3O60637 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TSPAN3O60637 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN3O60637 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TSPAN3O60637 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN3O60637 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN3O60637 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN3O60637 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.81■■□□□ 1.08
TSPAN3O60637 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.81■■□□□ 1.08
TSPAN3O60637 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.81■■□□□ 1.08
TSPAN3O60637 ID1-201ENST00000376105 1233 ntBASIC21.81■■□□□ 1.08
TSPAN3O60637 AC026185.1-201ENST00000445748 174 ntBASIC21.81■■□□□ 1.08
TSPAN3O60637 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN3O60637 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN3O60637 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.81■■□□□ 1.08
TSPAN3O60637 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN3O60637 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.81■■□□□ 1.08
TSPAN3O60637 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.81■■□□□ 1.08
TSPAN3O60637 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN3O60637 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.81■■□□□ 1.08
TSPAN3O60637 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TSPAN3O60637 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN3O60637 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.8■■□□□ 1.08
TSPAN3O60637 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN3O60637 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN3O60637 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TSPAN3O60637 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN3O60637 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.8■■□□□ 1.08
TSPAN3O60637 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.8■■□□□ 1.08
TSPAN3O60637 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN3O60637 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN3O60637 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN3O60637 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN3O60637 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN3O60637 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN3O60637 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN3O60637 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TSPAN3O60637 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.79■■□□□ 1.08
TSPAN3O60637 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN3O60637 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.78■■□□□ 1.08
TSPAN3O60637 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN3O60637 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN3O60637 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.78■■□□□ 1.08
TSPAN3O60637 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN3O60637 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN3O60637 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.78■■□□□ 1.08
TSPAN3O60637 KRT18P20-201ENST00000548986 1279 ntBASIC21.78■■□□□ 1.08
TSPAN3O60637 DUX4L16-201ENST00000555130 1264 ntBASIC21.78■■□□□ 1.08
TSPAN3O60637 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.78■■□□□ 1.08
TSPAN3O60637 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN3O60637 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TSPAN3O60637 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.78■■□□□ 1.08
TSPAN3O60637 AC008175.2-201ENST00000612840 297 ntBASIC21.78■■□□□ 1.08
TSPAN3O60637 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.78■■□□□ 1.08
TSPAN3O60637 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.78■■□□□ 1.08
TSPAN3O60637 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN3O60637 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN3O60637 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TSPAN3O60637 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.77■■□□□ 1.08
TSPAN3O60637 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 CROCCP5-201ENST00000436658 830 ntBASIC21.77■■□□□ 1.08
TSPAN3O60637 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TSPAN3O60637 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.77■■□□□ 1.08
TSPAN3O60637 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.77■■□□□ 1.08
TSPAN3O60637 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.77■■□□□ 1.08
TSPAN3O60637 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN3O60637 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
TSPAN3O60637 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN3O60637 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN3O60637 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.76■■□□□ 1.07
TSPAN3O60637 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.76■■□□□ 1.07
TSPAN3O60637 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms