Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NPHS1O60500 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPHS1O60500 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPHS1O60500 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPHS1O60500 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.6■□□□□ 0.89
NPHS1O60500 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.6■□□□□ 0.89
NPHS1O60500 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.6■□□□□ 0.89
NPHS1O60500 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NPHS1O60500 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.6■□□□□ 0.89
NPHS1O60500 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.6■□□□□ 0.89
NPHS1O60500 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NPHS1O60500 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.6■□□□□ 0.89
NPHS1O60500 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.6■□□□□ 0.89
NPHS1O60500 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.6■□□□□ 0.89
NPHS1O60500 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NPHS1O60500 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
NPHS1O60500 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPHS1O60500 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.59■□□□□ 0.89
NPHS1O60500 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NPHS1O60500 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.59■□□□□ 0.89
NPHS1O60500 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
NPHS1O60500 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NPHS1O60500 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.59■□□□□ 0.89
NPHS1O60500 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.59■□□□□ 0.89
NPHS1O60500 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.59■□□□□ 0.89
NPHS1O60500 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.59■□□□□ 0.89
NPHS1O60500 MIR4466-201ENST00000606121 54 ntBASIC20.59■□□□□ 0.89
NPHS1O60500 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.59■□□□□ 0.89
NPHS1O60500 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.59■□□□□ 0.89
NPHS1O60500 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPHS1O60500 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.59■□□□□ 0.89
NPHS1O60500 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPHS1O60500 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPHS1O60500 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
NPHS1O60500 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.58■□□□□ 0.89
NPHS1O60500 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NPHS1O60500 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPHS1O60500 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.58■□□□□ 0.89
NPHS1O60500 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPHS1O60500 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.58■□□□□ 0.89
NPHS1O60500 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.58■□□□□ 0.89
NPHS1O60500 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPHS1O60500 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
NPHS1O60500 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPHS1O60500 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPHS1O60500 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPHS1O60500 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPHS1O60500 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.58■□□□□ 0.88
NPHS1O60500 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPHS1O60500 AC006128.1-201ENST00000624704 1661 ntBASIC20.58■□□□□ 0.88
NPHS1O60500 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NPHS1O60500 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPHS1O60500 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPHS1O60500 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPHS1O60500 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.57■□□□□ 0.88
NPHS1O60500 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.57■□□□□ 0.88
NPHS1O60500 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPHS1O60500 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
NPHS1O60500 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.57■□□□□ 0.88
NPHS1O60500 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.57■□□□□ 0.88
NPHS1O60500 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.57■□□□□ 0.88
NPHS1O60500 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.57■□□□□ 0.88
NPHS1O60500 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.57■□□□□ 0.88
NPHS1O60500 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NPHS1O60500 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPHS1O60500 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPHS1O60500 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPHS1O60500 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPHS1O60500 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.56■□□□□ 0.88
NPHS1O60500 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPHS1O60500 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPHS1O60500 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
NPHS1O60500 SMUG1P1-201ENST00000590640 811 ntBASIC20.56■□□□□ 0.88
NPHS1O60500 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPHS1O60500 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPHS1O60500 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms