Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.36■□□□□ 0.53
XRCC2O43543 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.36■□□□□ 0.53
XRCC2O43543 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
XRCC2O43543 AC026310.3-201ENST00000625186 2373 ntBASIC18.35■□□□□ 0.53
XRCC2O43543 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC2O43543 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.35■□□□□ 0.53
XRCC2O43543 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.35■□□□□ 0.53
XRCC2O43543 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
XRCC2O43543 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC2O43543 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.35■□□□□ 0.53
XRCC2O43543 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
XRCC2O43543 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.35■□□□□ 0.53
XRCC2O43543 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.35■□□□□ 0.53
XRCC2O43543 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.35■□□□□ 0.53
XRCC2O43543 AL354811.1-201ENST00000610286 706 ntBASIC18.35■□□□□ 0.53
XRCC2O43543 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.35■□□□□ 0.53
XRCC2O43543 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.35■□□□□ 0.53
XRCC2O43543 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.35■□□□□ 0.53
XRCC2O43543 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC2O43543 AC005224.4-201ENST00000583262 1652 ntBASIC18.34■□□□□ 0.53
XRCC2O43543 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
XRCC2O43543 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.34■□□□□ 0.53
XRCC2O43543 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.34■□□□□ 0.53
XRCC2O43543 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.34■□□□□ 0.53
XRCC2O43543 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.34■□□□□ 0.53
XRCC2O43543 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC2O43543 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC2O43543 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC2O43543 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC2O43543 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.33■□□□□ 0.53
XRCC2O43543 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC2O43543 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.33■□□□□ 0.53
XRCC2O43543 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.33■□□□□ 0.53
XRCC2O43543 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC2O43543 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC2O43543 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC2O43543 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
XRCC2O43543 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.33■□□□□ 0.53
XRCC2O43543 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
XRCC2O43543 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.33■□□□□ 0.52
XRCC2O43543 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC2O43543 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC2O43543 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.33■□□□□ 0.52
XRCC2O43543 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.33■□□□□ 0.52
XRCC2O43543 AC012414.1-201ENST00000556676 535 ntBASIC18.33■□□□□ 0.52
XRCC2O43543 AC005837.3-201ENST00000612163 286 ntBASIC18.33■□□□□ 0.52
XRCC2O43543 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
XRCC2O43543 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
XRCC2O43543 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC2O43543 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC2O43543 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC2O43543 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
XRCC2O43543 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.32■□□□□ 0.52
XRCC2O43543 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
XRCC2O43543 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC2O43543 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC2O43543 AC055733.4-201ENST00000638462 1354 ntBASIC18.32■□□□□ 0.52
XRCC2O43543 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.32■□□□□ 0.52
XRCC2O43543 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC2O43543 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC2O43543 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.32■□□□□ 0.52
XRCC2O43543 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC2O43543 AL358852.1-201ENST00000623174 1268 ntBASIC18.32■□□□□ 0.52
XRCC2O43543 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC2O43543 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
XRCC2O43543 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC2O43543 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC2O43543 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.31■□□□□ 0.52
XRCC2O43543 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
XRCC2O43543 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.31■□□□□ 0.52
XRCC2O43543 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
XRCC2O43543 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.31■□□□□ 0.52
XRCC2O43543 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
XRCC2O43543 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
XRCC2O43543 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
XRCC2O43543 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XRCC2O43543 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms