Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC126544.1-201ENST00000580842 1059 ntBASIC21.01■□□□□ 0.95
PHGDHO43175 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.01■□□□□ 0.95
PHGDHO43175 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.01■□□□□ 0.95
PHGDHO43175 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
PHGDHO43175 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
PHGDHO43175 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHGDHO43175 AC135279.3-201ENST00000610945 1311 ntBASIC21.01■□□□□ 0.95
PHGDHO43175 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PHGDHO43175 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21■□□□□ 0.95
PHGDHO43175 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PHGDHO43175 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21■□□□□ 0.95
PHGDHO43175 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21■□□□□ 0.95
PHGDHO43175 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21■□□□□ 0.95
PHGDHO43175 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21■□□□□ 0.95
PHGDHO43175 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21■□□□□ 0.95
PHGDHO43175 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21■□□□□ 0.95
PHGDHO43175 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PHGDHO43175 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHGDHO43175 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHGDHO43175 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHGDHO43175 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHGDHO43175 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PHGDHO43175 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PHGDHO43175 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHGDHO43175 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.99■□□□□ 0.95
PHGDHO43175 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHGDHO43175 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHGDHO43175 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.99■□□□□ 0.95
PHGDHO43175 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.99■□□□□ 0.95
PHGDHO43175 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHGDHO43175 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHGDHO43175 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PHGDHO43175 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.98■□□□□ 0.95
PHGDHO43175 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PHGDHO43175 AC008764.7-201ENST00000593779 1081 ntBASIC20.98■□□□□ 0.95
PHGDHO43175 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PHGDHO43175 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.98■□□□□ 0.95
PHGDHO43175 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 AL157384.1-201ENST00000445995 2473 ntBASIC20.98■□□□□ 0.95
PHGDHO43175 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHGDHO43175 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.97■□□□□ 0.95
PHGDHO43175 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHGDHO43175 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PHGDHO43175 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHGDHO43175 IGHV3-19-201ENST00000521488 291 ntBASIC20.97■□□□□ 0.95
PHGDHO43175 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHGDHO43175 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.97■□□□□ 0.95
PHGDHO43175 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.97■□□□□ 0.95
PHGDHO43175 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHGDHO43175 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHGDHO43175 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHGDHO43175 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
PHGDHO43175 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHGDHO43175 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
PHGDHO43175 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PHGDHO43175 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHGDHO43175 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHGDHO43175 AL049796.1-201ENST00000565336 1766 ntBASIC20.96■□□□□ 0.95
PHGDHO43175 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.96■□□□□ 0.95
PHGDHO43175 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHGDHO43175 AC096631.2-201ENST00000436136 790 ntBASIC20.96■□□□□ 0.95
PHGDHO43175 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.96■□□□□ 0.95
PHGDHO43175 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHGDHO43175 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.96■□□□□ 0.95
PHGDHO43175 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHGDHO43175 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHGDHO43175 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHGDHO43175 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHGDHO43175 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PHGDHO43175 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.96■□□□□ 0.95
PHGDHO43175 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms