Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RS1O15537 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RS1O15537 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RS1O15537 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.18■□□□□ 0.02
RS1O15537 AC126544.1-201ENST00000580842 1059 ntBASIC15.18■□□□□ 0.02
RS1O15537 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RS1O15537 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RS1O15537 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RS1O15537 AC135279.3-201ENST00000610945 1311 ntBASIC15.17■□□□□ 0.02
RS1O15537 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RS1O15537 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.17■□□□□ 0.02
RS1O15537 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.17■□□□□ 0.02
RS1O15537 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 AL024507.2-201ENST00000606070 2574 ntBASIC15.17■□□□□ 0.02
RS1O15537 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RS1O15537 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RS1O15537 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RS1O15537 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.16■□□□□ 0.02
RS1O15537 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.16■□□□□ 0.02
RS1O15537 IGHV3-19-201ENST00000521488 291 ntBASIC15.16■□□□□ 0.02
RS1O15537 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.16■□□□□ 0.02
RS1O15537 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RS1O15537 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RS1O15537 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RS1O15537 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RS1O15537 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.15■□□□□ 0.02
RS1O15537 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RS1O15537 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.15■□□□□ 0.02
RS1O15537 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.15■□□□□ 0.02
RS1O15537 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RS1O15537 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.14■□□□□ 0.01
RS1O15537 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 AC008406.3-201ENST00000620001 1374 ntBASIC15.14■□□□□ 0.01
RS1O15537 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.14■□□□□ 0.01
RS1O15537 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
RS1O15537 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.14■□□□□ 0.01
RS1O15537 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.14■□□□□ 0.01
RS1O15537 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.14■□□□□ 0.01
RS1O15537 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
RS1O15537 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.14■□□□□ 0.01
RS1O15537 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.14■□□□□ 0.01
RS1O15537 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RS1O15537 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RS1O15537 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.14■□□□□ 0.01
RS1O15537 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RS1O15537 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.13■□□□□ 0.01
RS1O15537 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RS1O15537 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RS1O15537 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
RS1O15537 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms