Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SMAD9O15198 AL137060.1-201ENST00000618151 2648 ntBASIC19.13■□□□□ 0.65
SMAD9O15198 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMAD9O15198 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.13■□□□□ 0.65
SMAD9O15198 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.13■□□□□ 0.65
SMAD9O15198 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.13■□□□□ 0.65
SMAD9O15198 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMAD9O15198 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD9O15198 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD9O15198 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD9O15198 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SMAD9O15198 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SMAD9O15198 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 FAM99A-202ENST00000538190 1989 ntBASIC19.12■□□□□ 0.65
SMAD9O15198 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.12■□□□□ 0.65
SMAD9O15198 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMAD9O15198 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMAD9O15198 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SMAD9O15198 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.12■□□□□ 0.65
SMAD9O15198 KRT18P14-201ENST00000534205 1250 ntBASIC19.12■□□□□ 0.65
SMAD9O15198 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMAD9O15198 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD9O15198 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
SMAD9O15198 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
SMAD9O15198 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.11■□□□□ 0.65
SMAD9O15198 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SMAD9O15198 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SMAD9O15198 DUX4L2-201ENST00000561772 1275 ntBASIC19.11■□□□□ 0.65
SMAD9O15198 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.11■□□□□ 0.65
SMAD9O15198 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SMAD9O15198 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
SMAD9O15198 DUX4L6-201ENST00000626483 1275 ntBASIC19.11■□□□□ 0.65
SMAD9O15198 DUX4L1-201ENST00000627662 1275 ntBASIC19.11■□□□□ 0.65
SMAD9O15198 DUX4L8-201ENST00000629013 1275 ntBASIC19.11■□□□□ 0.65
SMAD9O15198 DUX4L3-201ENST00000630187 1275 ntBASIC19.11■□□□□ 0.65
SMAD9O15198 DUX4L7-201ENST00000630678 1275 ntBASIC19.11■□□□□ 0.65
SMAD9O15198 DUX4L5-201ENST00000630834 1275 ntBASIC19.11■□□□□ 0.65
SMAD9O15198 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.11■□□□□ 0.65
SMAD9O15198 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD9O15198 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SMAD9O15198 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SMAD9O15198 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD9O15198 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD9O15198 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SMAD9O15198 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.1■□□□□ 0.65
SMAD9O15198 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SMAD9O15198 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.1■□□□□ 0.65
SMAD9O15198 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD9O15198 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD9O15198 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.1■□□□□ 0.65
SMAD9O15198 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD9O15198 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD9O15198 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SMAD9O15198 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.09■□□□□ 0.65
SMAD9O15198 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.09■□□□□ 0.65
SMAD9O15198 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.09■□□□□ 0.65
SMAD9O15198 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.09■□□□□ 0.65
SMAD9O15198 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 AC026471.6-201ENST00000622954 1905 ntBASIC19.09■□□□□ 0.65
SMAD9O15198 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMAD9O15198 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMAD9O15198 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMAD9O15198 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms