Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COPEO14579 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COPEO14579 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
COPEO14579 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COPEO14579 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.11■□□□□ 0.97
COPEO14579 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COPEO14579 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.11■□□□□ 0.97
COPEO14579 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COPEO14579 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.11■□□□□ 0.97
COPEO14579 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.1■□□□□ 0.97
COPEO14579 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.1■□□□□ 0.97
COPEO14579 AC003102.1-202ENST00000563394 1796 ntBASIC21.1■□□□□ 0.97
COPEO14579 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COPEO14579 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
COPEO14579 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
COPEO14579 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
COPEO14579 RARRES2P1-201ENST00000474487 481 ntBASIC21.1■□□□□ 0.97
COPEO14579 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COPEO14579 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COPEO14579 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COPEO14579 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.09■□□□□ 0.97
COPEO14579 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.09■□□□□ 0.97
COPEO14579 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.09■□□□□ 0.97
COPEO14579 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.09■□□□□ 0.97
COPEO14579 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COPEO14579 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
COPEO14579 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
COPEO14579 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPEO14579 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.09■□□□□ 0.97
COPEO14579 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPEO14579 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
COPEO14579 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.08■□□□□ 0.97
COPEO14579 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COPEO14579 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPEO14579 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
COPEO14579 AP004607.7-201ENST00000527152 1677 ntBASIC21.08■□□□□ 0.96
COPEO14579 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.08■□□□□ 0.96
COPEO14579 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
COPEO14579 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COPEO14579 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
COPEO14579 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.07■□□□□ 0.96
COPEO14579 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
COPEO14579 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
COPEO14579 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.07■□□□□ 0.96
COPEO14579 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.07■□□□□ 0.96
COPEO14579 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COPEO14579 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPEO14579 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.06■□□□□ 0.96
COPEO14579 AC092667.1-201ENST00000434301 2586 ntBASIC21.06■□□□□ 0.96
COPEO14579 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COPEO14579 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.06■□□□□ 0.96
COPEO14579 AC010525.1-201ENST00000585559 441 ntBASIC21.06■□□□□ 0.96
COPEO14579 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
COPEO14579 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COPEO14579 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.06■□□□□ 0.96
COPEO14579 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.05■□□□□ 0.96
COPEO14579 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
COPEO14579 KRT16P3-201ENST00000439127 1283 ntBASIC21.05■□□□□ 0.96
COPEO14579 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.05■□□□□ 0.96
COPEO14579 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms