Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.43■□□□□ 0.86
SDHDO14521 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.43■□□□□ 0.86
SDHDO14521 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.43■□□□□ 0.86
SDHDO14521 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SDHDO14521 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SDHDO14521 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SDHDO14521 AP006587.3-201ENST00000525742 1516 ntBASIC20.43■□□□□ 0.86
SDHDO14521 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.42■□□□□ 0.86
SDHDO14521 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SDHDO14521 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.42■□□□□ 0.86
SDHDO14521 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.42■□□□□ 0.86
SDHDO14521 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.42■□□□□ 0.86
SDHDO14521 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SDHDO14521 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.42■□□□□ 0.86
SDHDO14521 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.42■□□□□ 0.86
SDHDO14521 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.42■□□□□ 0.86
SDHDO14521 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDHDO14521 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SDHDO14521 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SDHDO14521 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.41■□□□□ 0.86
SDHDO14521 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 AP005435.1-201ENST00000529293 1178 ntBASIC20.41■□□□□ 0.86
SDHDO14521 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.41■□□□□ 0.86
SDHDO14521 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SDHDO14521 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.41■□□□□ 0.86
SDHDO14521 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.41■□□□□ 0.86
SDHDO14521 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SDHDO14521 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDHDO14521 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.41■□□□□ 0.86
SDHDO14521 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHDO14521 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHDO14521 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHDO14521 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHDO14521 SERBP1P1-201ENST00000396021 1160 ntBASIC20.4■□□□□ 0.86
SDHDO14521 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHDO14521 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SDHDO14521 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHDO14521 AC006128.1-201ENST00000624704 1661 ntBASIC20.4■□□□□ 0.86
SDHDO14521 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SDHDO14521 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.4■□□□□ 0.86
SDHDO14521 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SDHDO14521 AP005212.1-201ENST00000581547 1997 ntBASIC20.39■□□□□ 0.86
SDHDO14521 PLK5-205ENST00000642079 1969 ntBASIC20.39■□□□□ 0.86
SDHDO14521 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.39■□□□□ 0.86
SDHDO14521 GABARAPL3-202ENST00000624044 1851 ntBASIC20.39■□□□□ 0.86
SDHDO14521 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.39■□□□□ 0.86
SDHDO14521 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SDHDO14521 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDHDO14521 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHDO14521 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHDO14521 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHDO14521 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDHDO14521 SLC47A1P1-202ENST00000449666 945 ntBASIC20.39■□□□□ 0.85
SDHDO14521 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SDHDO14521 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHDO14521 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHDO14521 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.38■□□□□ 0.85
SDHDO14521 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
SDHDO14521 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHDO14521 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHDO14521 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHDO14521 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SDHDO14521 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.38■□□□□ 0.85
SDHDO14521 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SDHDO14521 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SDHDO14521 AC073314.1-201ENST00000568729 2216 ntBASIC20.38■□□□□ 0.85
SDHDO14521 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHDO14521 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SDHDO14521 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms