Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PDLIM1O00151 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PDLIM1O00151 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDLIM1O00151 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.05■□□□□ 0.8
PDLIM1O00151 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.05■□□□□ 0.8
PDLIM1O00151 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.05■□□□□ 0.8
PDLIM1O00151 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.05■□□□□ 0.8
PDLIM1O00151 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.05■□□□□ 0.8
PDLIM1O00151 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM1O00151 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM1O00151 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.04■□□□□ 0.8
PDLIM1O00151 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM1O00151 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PDLIM1O00151 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.04■□□□□ 0.8
PDLIM1O00151 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM1O00151 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM1O00151 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM1O00151 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM1O00151 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM1O00151 AC004687.1-201ENST00000579003 1625 ntBASIC20.04■□□□□ 0.8
PDLIM1O00151 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM1O00151 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM1O00151 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM1O00151 AC026471.6-201ENST00000622954 1905 ntBASIC20.04■□□□□ 0.8
PDLIM1O00151 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PDLIM1O00151 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PDLIM1O00151 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PDLIM1O00151 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.03■□□□□ 0.8
PDLIM1O00151 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PDLIM1O00151 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PDLIM1O00151 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM1O00151 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
PDLIM1O00151 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM1O00151 FEM1AP1-201ENST00000431297 1995 ntBASIC20.03■□□□□ 0.8
PDLIM1O00151 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM1O00151 AL512631.2-201ENST00000604634 923 ntBASIC20.02■□□□□ 0.8
PDLIM1O00151 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM1O00151 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM1O00151 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM1O00151 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM1O00151 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM1O00151 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM1O00151 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.02■□□□□ 0.79
PDLIM1O00151 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.02■□□□□ 0.79
PDLIM1O00151 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDLIM1O00151 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PDLIM1O00151 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM1O00151 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM1O00151 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PDLIM1O00151 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
PDLIM1O00151 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM1O00151 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM1O00151 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.01■□□□□ 0.79
PDLIM1O00151 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.01■□□□□ 0.79
PDLIM1O00151 AC131281.2-201ENST00000520478 145 ntBASIC20.01■□□□□ 0.79
PDLIM1O00151 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM1O00151 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.01■□□□□ 0.79
PDLIM1O00151 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.01■□□□□ 0.79
PDLIM1O00151 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM1O00151 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PDLIM1O00151 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PDLIM1O00151 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM1O00151 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM1O00151 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM1O00151 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM1O00151 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
PDLIM1O00151 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM1O00151 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM1O00151 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20■□□□□ 0.79
PDLIM1O00151 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20■□□□□ 0.79
PDLIM1O00151 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM1O00151 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM1O00151 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM1O00151 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
PDLIM1O00151 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms