Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MFSD11-216ENST00000590393 1141 ntBASIC19.25■□□□□ 0.67
NPIPA3F8WFD2 UBE2DNL-204ENST00000602536 740 ntBASIC19.25■□□□□ 0.67
NPIPA3F8WFD2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.25■□□□□ 0.67
NPIPA3F8WFD2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA3F8WFD2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA3F8WFD2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA3F8WFD2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA3F8WFD2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.24■□□□□ 0.67
NPIPA3F8WFD2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 MIR663A-201ENST00000385250 93 ntBASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.23■□□□□ 0.67
NPIPA3F8WFD2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NPIPA3F8WFD2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 AL109923.1-201ENST00000618799 583 ntBASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPA3F8WFD2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms