Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LOC285556D6RIA3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 AL591742.1-201ENST00000604433 565 ntBASIC24.46■■□□□ 1.51
LOC285556D6RIA3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC285556D6RIA3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
LOC285556D6RIA3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC285556D6RIA3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
LOC285556D6RIA3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LOC285556D6RIA3 AP003097.1-201ENST00000530657 1135 ntBASIC24.45■■□□□ 1.5
LOC285556D6RIA3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.45■■□□□ 1.5
LOC285556D6RIA3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.45■■□□□ 1.5
LOC285556D6RIA3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.45■■□□□ 1.5
LOC285556D6RIA3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.45■■□□□ 1.5
LOC285556D6RIA3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
LOC285556D6RIA3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
LOC285556D6RIA3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 AC006058.3-201ENST00000606217 1069 ntBASIC24.43■■□□□ 1.5
LOC285556D6RIA3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LOC285556D6RIA3 KRT17P1-201ENST00000399211 1546 ntBASIC24.42■■□□□ 1.5
LOC285556D6RIA3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.42■■□□□ 1.5
LOC285556D6RIA3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 ESRRAP1-201ENST00000400596 1257 ntBASIC24.41■■□□□ 1.5
LOC285556D6RIA3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 AC091799.1-201ENST00000422823 811 ntBASIC24.41■■□□□ 1.5
LOC285556D6RIA3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
LOC285556D6RIA3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms