Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01548A6NM66 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01548A6NM66 LINC00565-201ENST00000562710 2331 ntBASIC16.73■□□□□ 0.27
LINC01548A6NM66 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 AP001160.3-201ENST00000601484 763 ntBASIC16.72■□□□□ 0.27
LINC01548A6NM66 AC053503.5-201ENST00000601508 636 ntBASIC16.72■□□□□ 0.27
LINC01548A6NM66 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC01548A6NM66 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01548A6NM66 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01548A6NM66 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01548A6NM66 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LINC01548A6NM66 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01548A6NM66 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC01548A6NM66 AC137761.2-201ENST00000561729 223 ntBASIC16.71■□□□□ 0.27
LINC01548A6NM66 AC145350.3-201ENST00000569033 163 ntBASIC16.71■□□□□ 0.27
LINC01548A6NM66 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01548A6NM66 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01548A6NM66 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01548A6NM66 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01548A6NM66 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01548A6NM66 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC01548A6NM66 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC01548A6NM66 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC01548A6NM66 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.7■□□□□ 0.26
LINC01548A6NM66 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC01548A6NM66 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC01548A6NM66 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LINC01548A6NM66 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01548A6NM66 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC01548A6NM66 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.69■□□□□ 0.26
LINC01548A6NM66 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 AC004911.1-201ENST00000416316 871 ntBASIC16.69■□□□□ 0.26
LINC01548A6NM66 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 AC138907.5-202ENST00000569484 235 ntBASIC16.69■□□□□ 0.26
LINC01548A6NM66 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.69■□□□□ 0.26
LINC01548A6NM66 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01548A6NM66 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 AC079834.2-201ENST00000609776 1949 ntBASIC16.68■□□□□ 0.26
LINC01548A6NM66 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01548A6NM66 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC01548A6NM66 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms