Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 AL136967.2-201ENST00000623968 743 ntBASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
TRIM49BA6NDI0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM49BA6NDI0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.33■■□□□ 1.32
TRIM49BA6NDI0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 RASA4CP-201ENST00000424092 1398 ntBASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 AC055733.4-201ENST00000638462 1354 ntBASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49BA6NDI0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49BA6NDI0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49BA6NDI0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 MIR572-201ENST00000384983 95 ntBASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 AC091305.1-201ENST00000479476 895 ntBASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 SUDS3P1-201ENST00000505831 966 ntBASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 AL049796.1-201ENST00000565336 1766 ntBASIC23.29■■□□□ 1.32
TRIM49BA6NDI0 AC005224.4-201ENST00000583262 1652 ntBASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 AC009237.3-201ENST00000393279 1427 ntBASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TRIM49BA6NDI0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIM49BA6NDI0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM49BA6NDI0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM49BA6NDI0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM49BA6NDI0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM49BA6NDI0 AL157384.1-201ENST00000445995 2473 ntBASIC23.27■■□□□ 1.32
TRIM49BA6NDI0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.27■■□□□ 1.32
TRIM49BA6NDI0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
TRIM49BA6NDI0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TRIM49BA6NDI0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49BA6NDI0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms