Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC189A1A4V9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC189A1A4V9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC189A1A4V9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC189A1A4V9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC189A1A4V9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC189A1A4V9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC189A1A4V9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC189A1A4V9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 AC010525.1-201ENST00000585559 441 ntBASIC21.07■□□□□ 0.96
CCDC189A1A4V9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC189A1A4V9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 AC131281.2-201ENST00000520478 145 ntBASIC21.06■□□□□ 0.96
CCDC189A1A4V9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 AC005229.4-201ENST00000610085 2198 ntBASIC21.06■□□□□ 0.96
CCDC189A1A4V9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC189A1A4V9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC189A1A4V9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC189A1A4V9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC189A1A4V9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms