Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
TCRBV9S1A1TA0A576 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 FEM1AP1-201ENST00000431297 1995 ntBASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TCRBV9S1A1TA0A576 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV9S1A1TA0A576 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TCRBV9S1A1TA0A576 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TCRBV9S1A1TA0A576 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 SMUG1P1-201ENST00000590640 811 ntBASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
TCRBV9S1A1TA0A576 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV9S1A1TA0A576 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TCRBV9S1A1TA0A576 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms