Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC010141.2-201ENST00000452426 721 ntBASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC090192.1-201ENST00000517740 490 ntBASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC138907.5-202ENST00000569484 235 ntBASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC080038.1-201ENST00000611274 1154 ntBASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC242852.2-201ENST00000615738 1807 ntBASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV4-28A0A0C4DH34 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 EEF1DP3-203ENST00000566025 782 ntBASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC053503.5-201ENST00000601508 636 ntBASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 UBE2DNL-204ENST00000602536 740 ntBASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IGHV4-28A0A0C4DH34 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGHV4-28A0A0C4DH34 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IGHV4-28A0A0C4DH34 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGHV4-28A0A0C4DH34 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGHV4-28A0A0C4DH34 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGHV4-28A0A0C4DH34 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGHV4-28A0A0C4DH34 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGHV4-28A0A0C4DH34 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV4-28A0A0C4DH34 FAM99A-202ENST00000538190 1989 ntBASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC011767.1-201ENST00000617410 1153 ntBASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC003102.1-202ENST00000563394 1796 ntBASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.25■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV4-28A0A0C4DH34 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms