Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 AC010525.1-201ENST00000585559 441 ntBASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 SYT6-210ENST00000641643 1587 ntBASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 GUSBP5-201ENST00000418136 578 ntBASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 AP005435.1-201ENST00000529293 1178 ntBASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV21A0A0B4J279 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 AIRN-201ENST00000601203 4374 ntBASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV21A0A0B4J279 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV21A0A0B4J279 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 AL049796.1-201ENST00000565336 1766 ntBASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 AL512631.2-201ENST00000604634 923 ntBASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV21A0A0B4J279 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.64■□□□□ 0.1
TRAV21A0A0B4J279 AC003102.1-202ENST00000563394 1796 ntBASIC15.64■□□□□ 0.1
TRAV21A0A0B4J279 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV21A0A0B4J279 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV21A0A0B4J279 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV21A0A0B4J279 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV21A0A0B4J279 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV21A0A0B4J279 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV21A0A0B4J279 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms