Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 AC079140.4-201ENST00000507448 529 ntBASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 AC080038.1-201ENST00000611274 1154 ntBASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 KRT18P61-201ENST00000585825 1298 ntBASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV20A0A0B4J274 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
TRAV20A0A0B4J274 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.89■□□□□ 0.46
TRAV20A0A0B4J274 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV20A0A0B4J274 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 KRT18P11-201ENST00000435214 1283 ntBASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV20A0A0B4J274 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 BID-214ENST00000617586 542 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 AC009237.3-201ENST00000393279 1427 ntBASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV20A0A0B4J274 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 AL158211.5-201ENST00000623583 2518 ntBASIC17.87■□□□□ 0.45
TRAV20A0A0B4J274 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAV20A0A0B4J274 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms