Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV12-3A0A0B4J271 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 AC135279.3-201ENST00000610945 1311 ntBASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 AC233992.3-201ENST00000607491 485 ntBASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV12-3A0A0B4J271 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 AF106564.1-201ENST00000607058 2553 ntBASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV12-3A0A0B4J271 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 AC096631.2-201ENST00000436136 790 ntBASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 AC008764.7-201ENST00000593779 1081 ntBASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV12-3A0A0B4J271 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 PBX2P1-201ENST00000493219 1291 ntBASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 FEM1AP4-201ENST00000443167 1987 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms