Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV5A0A0B4J249 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 AC009299.2-201ENST00000482477 511 ntBASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 AC068587.7-201ENST00000641602 218 ntBASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV5A0A0B4J249 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 MIR3181-201ENST00000578512 73 ntBASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 AC087239.1-201ENST00000622671 572 ntBASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 AC003102.1-202ENST00000563394 1796 ntBASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV5A0A0B4J249 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 AC010141.3-201ENST00000456659 717 ntBASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 AC010525.1-201ENST00000585559 441 ntBASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV5A0A0B4J249 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV5A0A0B4J249 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms